Gene Information

Name : sgaE (APECO78_01920)
Accession : YP_007379567.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.4
Position : 412898 - 413584 bp
Length : 687 bp
Strand : +
Note : COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

DNA sequence :
ATGCAAAAGCTAAAACAGCAGGTATTTGAAGCCAACATGGATCTGCCGCGCTATGGGCTGGTGACCTTTACCTGGGGCAA
CGTCAGCGCTATCGACCGCGAACGCGGGCTGGTGGTGATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCAGACG
ATATGGTGGTGGTCGATATGAGCGGCAAGGTGGTAGAAGGGAAGTATCGCCCGTCTTCTGACACCGCGACGCATCTTGAA
CTCTACCGTCGTTACCCGTCGCTCGGCGGCATTGTCCATACCCATTCCACTCATGCCACCGCATGGGCGCAGGCGGGGCT
GGCGATCCCGGCGTTAGGCACCACGCACGCCGACTACTTCTTTGGTGACATCCCGTGTACGCGTGGATTAAGCGAAGAAG
AGGTGCAGGGTGAGTATGAACTGAACACTGGCAAAGTGATTATCGAAACGCTGGGCAACGCCGAGCCGCTGCATACGCCG
GGAATTGTGGTGTATCAGCACGGACCGTTCGCCTGGGGGAAAGATGCCCACGACGCGGTGCATAACGCGGTAGTGATGGA
AGAAGTGGCGAAAATGGCGTGGATTGCGCGCAGTATTAATCCACAACTCAATCACATCGACAGCTTCCTGATGAATAAAC
ACTTCATGCGTAAGCATGGTCCTAACGCTTATTACGGGCAGAAGTAA

Protein sequence :
MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKADDMVVVDMSGKVVEGKYRPSSDTATHLE
LYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGNAEPLHTP
GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRKHGPNAYYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 5e-63 55