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Name : APECO78_18600 (APECO78_18600) Accession : YP_007382883.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Virulence Product : type II secretion protein GspH Function : - COG functional category : - COG ID : - EC number : - Position : 3862595 - 3863158 bp Length : 564 bp Strand : - Note : COG2165 Type II secretory pathway, pseudopilin PulG DNA sequence : GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGTTGGTGATTTTCCTTATCGGCCTTGCCAGTTCGGGCGTGGTACA GACGTTTGCGACCGATTCTGAACCGCCCGCGAAAAAAGCGGCACAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACA GGGCAGTGATTGAAGGGCAGACACTCGGTGTGCTAATCGACGCGCCTGGCTATCAGTTTATGCAGCGTCGTCAGGGGCAG TGGTTGCCCGTTTCCGCGACCCGGTTATCGGCACAGGTTACGGTGCCAAAACAGGTGCAGATGCTGTTACAACCCGGAAG TGATATCTGGCAGAAGGAGTATGCGCTGGAGCTGCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAA AAGAGGCGAAAAAGAAGACGCCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCG GCGGCGCAAAACGCATGTTGGGCGGTAAAACTGGCGCACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCC ATGA Protein sequence : MPERGFTLLEIMLVIFLIGLASSGVVQTFATDSEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDAPGYQFMQRRQGQ WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS AAQNACWAVKLAHDGALSLNQCDERMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspH | CAE85230.1 | GspH, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-79 | 99 |
| gspH | YP_854403.1 | type II secretion protein GspH | Not tested | PAI I APEC-O1 | Protein | 1e-84 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| APECO78_18600 | YP_007382883.1 | type II secretion protein GspH | VFG2051 | Protein | 3e-78 | 96 |
