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Name : APECO78_18585 (APECO78_18585) Accession : YP_007382880.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Virulence Product : General secretion pathway protein K Function : - COG functional category : - COG ID : - EC number : - Position : 3860651 - 3861628 bp Length : 978 bp Strand : - Note : COG3156 Type II secretory pathway, component PulK DNA sequence : ATGATCACCTCACCACCAAAACGCGGAATGGCACTGGTTGTGGTGCTGGTATTGCTGGCAGTTATGATGCTGGTAACCAT CACGCTTTCCGGGCGGATGCAGCAGCAACTGGGAAGAACGCGCAGCCAGCAGGAGTACCAGCAGGCGCTGTGGTACAGCG CCAGTGCAGAAAGCCTGGCGTTGAGCGCGCTCAGTCTGAGCCTGAAAAATGAAAAGCGCGTGCATCTGGCACAACCGTGG GCTTCCGGCCCTCGTTTTTTCCCACTGCCGCAGGGGCAAATCGCCGTCACTCTGCGTGACGCACAGGCCTGCTTTAACCT GAATGCCCTCGCTCAGCCCACAACGGCGTCGCGTCCGCTCGCGGTACAACAACTGATTGCCCTGATCACGCGCCTGGATG TGCCTGCTTATCGGGCCGAACTGATAGCCGAAAGCCTGTGGGAGTTTATTGATGAAGACCGCAGCGTGCAGACGCGTCTG GGCCGTGAAGACAGCGAATATCTCGCCCGCTCGGTGCCTTTCTACGCCGCCAATCAACCGCTGGCCGATATCAGCGAGAT GCGCGTGGTGCAGGGAATGGACGCCGGGCTTTATCAAAAACTGAAACCGCTGGTCTGTGCGCTGCCGATGACCCGCCAGC AAATCAACATCAATACTTTAGACGTCACGCAAAGTGTGATTCTTGAGGCGCTGTTTGACCCGTGGTTAAGCCCTGTTCAG GCGCGGGCGTTATTACAACAACGTCCGGCGAAGGGCTGGGAAGATGTCGATCAGTTTCTTGCACAGCCGCTACTTGCTGA CGTCGATGAGCGTACTAAAAAACAGCTAAAAACCGTCCTGAGCGTGGACAGCAATTACTTCTGGCTGCGTTCAGATATCA CCGTGAATGAGATTGAACTGACGATGAACTCGTTAATTGTCCGCATGGGCCCACAACACTTTTCGGTTCTCTGGCATCAG ACAGGAGAAAGTGAGTGA Protein sequence : MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQEYQQALWYSASAESLALSALSLSLKNEKRVHLAQPW ASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTASRPLAVQQLIALITRLDVPAYRAELIAESLWEFIDEDRSVQTRL GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFDPWLSPVQ ARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQ TGESE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspK | YP_854400.1 | type II secretion protein GspK | Not tested | PAI I APEC-O1 | Protein | 8e-127 | 99 |
| gspK | CAE85227.1 | GspK, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-126 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| APECO78_18585 | YP_007382880.1 | General secretion pathway protein K | VFG2054 | Protein | 2e-126 | 99 |
