Gene Information

Name : cmtB (APECO78_18405)
Accession : YP_007382844.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Virulence
Product : PTS system mannitol-specific transporter subunit IIA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3826369 - 3826812 bp
Length : 444 bp
Strand : -
Note : COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

DNA sequence :
ATGCGGCTTAGTGATTATTTTCCAGAATCATCAATCTCAGTTATATATTCAGCAAAAGATTGGCAGGAAGCTATCGATTT
CTCGATGGTATCATTGCTGGATAAAAACTATATCAGCGAGAATTACATTCAGGCAATTAAAGATTCCACCATTAACAATG
GCCCTTATTATATTCTCGCACCAGGCGTGGCAATGCCTCATGCGCGACCGGAATGTGGGGCGCTTAAAACCGGGATGTCT
TTGACATTACTTGAACAAGGTGTTTATTTTCCGGGGAATGACGAACCAATTAAATTACTCATCGGACTCTCTGCTGCCGA
TGCCGATTCGCACATTGGCGCTATTCAGGCGTTAAGTGAATTACTGTGCGAAGAAGAAATACTCGAACAACTCTTAACAG
CATCATCAGAAAAACAATTAGCGGACATTATCAGCCGCGGATAA

Protein sequence :
MRLSDYFPESSISVIYSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGMS
LTLLEQGVYFPGNDEPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF10 AAK27337.1 unknown Not tested PAI-I AL862 Protein 9e-19 44
vpeA ADD91727.1 putative PTS system-specific IIA component VpeA Virulence PAI-I AL862 Protein 9e-19 44