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Name : APECO78_17980 (APECO78_17980) Accession : YP_007382761.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Virulence Product : type III secretion system protein SpaO Function : - COG functional category : - COG ID : - EC number : - Position : 3736576 - 3737523 bp Length : 948 bp Strand : - Note : COG1886 Flagellar motor switch/type III secretory pathway protein DNA sequence : ATGTTCGGTCTGAGGAAAGTAAATCGAAACACTCATATGTTTGAAACCACTTTTCAAAATTGGAAAGAAAATGGCGAAGA TGTTGCATTATTAATGCCCGAATTTAGTGCTAAATGGCTACCGATAGCAGAAGAGAGTGGCAGCTGGTCTGGATGGGTAT TGCTTGGAGAAATATTTCCCTTAATTTCATCTGAGCTCGCTGGGATGGCTTTAATGCCAGAAACGGAAAGGTTAATAGGG GAATGGCTCAGTTTATCAAGTTCCCCGTTAAATCTAAAGCATCCTGAACTAAAATATAATCGTTTGCGCGTAGGTAAAGT ATTTGATGGAGTATTGAGCCCTGCTCAACCACTAATAAGAATATGGACAGGGGAATTGAATCTTTGGTTAGATAAAGTCA CAGTCTGTCAATACGGAAACGCTCCAGCGTTAGACAAAAAATCATTATATTGGTCCATTCATTTTGTAATTGGATTTAGT AAAACATGTTACAGAAGTCTTATTGATATTGAAGTTGGTGATGTTTTATTAATCTCAAATAATTTGGCTTATGCGGTTAT TTATAATACAAAAATTTGTGATTTAATTTATCCAGAGGAGTTAAAAATGGCTGATCATTTTGAGTACGAGGAAGATTTTG AAACAGATGATTTTGATATCAAAAAAAACGAGAGTGAGATTTATGATGAAAATGACGATCAGATGATTAATAGTTTTGAA GACTTGCCTGTAAAAATTGAGTTTGTTCTTGGTAAGAAAATAATGAATCTATATGAAATAGACGAACTCTGTGCAAAAAG AATAATATCTCTGCTTCCTGAATCTGAGAAAAATATAGAAATACGTGTAAATGGCGCGCTAACTGGCTATGGCGAACTTG TTGAAGTGGATGATAAATTGGGCGTAGAGATTCATTCTTGGTTATCAGGGCATAATAATGTCAAATAG Protein sequence : MFGLRKVNRNTHMFETTFQNWKENGEDVALLMPEFSAKWLPIAEESGSWSGWVLLGEIFPLISSELAGMALMPETERLIG EWLSLSSSPLNLKHPELKYNRLRVGKVFDGVLSPAQPLIRIWTGELNLWLDKVTVCQYGNAPALDKKSLYWSIHFVIGFS KTCYRSLIDIEVGDVLLISNNLAYAVIYNTKICDLIYPEELKMADHFEYEEDFETDDFDIKKNESEIYDENDDQMINSFE DLPVKIEFVLGKKIMNLYEIDELCAKRIISLLPESEKNIEIRVNGALTGYGELVEVDDKLGVEIHSWLSGHNNVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epaO | AAZ31294.1 | EpaO | Virulence | ETT2 | Protein | 1e-130 | 99 |
| ECs3726 | NP_311753.1 | surface presentation of antigens protein SpaO | Not tested | LIM | Protein | 8e-121 | 94 |
