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Name : APECO78_17965 (APECO78_17965) Accession : YP_007382758.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Virulence Product : type III secretion protein EpaR Function : - COG functional category : - COG ID : - EC number : - Position : 3734882 - 3735649 bp Length : 768 bp Strand : - Note : COG4791 Type III secretory pathway, component EscT DNA sequence : ATGGAGGAGGCGATACTCTATCAGTTGCATAGTCTGCTGGCTGCTACAGCGCTCGGTTTTTGCCGATTGGCACCAACTTT CTATTTGTTACCATTTTTCGCCAGTGGGAATATACCAACAGTAGTCCGTCATCCAATAATAATAGTGGTATCATGTGCAT TATTTCAGCATTACCACTATGAATTATCGACCTTAAATGAAATCGATATCGCTTTGTTTGCTGCCAGAGAAATTATCATA GGGCTGTTCATTGCTTGCTTATTATCATCCCCGTTTTGGATTTTCCTTGCTATAGGTAGTTTTATCGATAACCAACGTGG TGCAACGTTAAGTAGTACTTTGGATCCTGCTACTGGTGTCGATACTTCGGAATTAGCAAGATTATTTAACCTATTCTCTG CAGCGGTTTATCTTACTAACGGTGGATTGAACTTTATTCTGGAAACTCTTTGGCAAAGTTATAATTTATGGCCTTCAGGC AATTTTAATTTTCCTAAATTAGAGCCTTTATTCTCATATATTAATAACATAATGACTCATACTATCGTTTACGCAAGCCC CGTGATTGCCGTTATGCTGGGCGGTGAGGCTGTCCTGGGATTGCTGGCACGTTATGCTTCACAACTAAATGCTTTTGCCA TTTCACTGACTGTCAAAAGTGCGCTGGCATTTTTAATATTAATTATTTATTTTGGCCCAATACTGGCTGAACGAGTAATG CCGTTATCCTTTTTCCCAGAACAATTGCAACTATACATTGAGAAATAG Protein sequence : MEEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALFQHYHYELSTLNEIDIALFAAREIII GLFIACLLSSPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTNGGLNFILETLWQSYNLWPSG NFNFPKLEPLFSYINNIMTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILIIYFGPILAERVM PLSFFPEQLQLYIEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epaR | AAZ31291.1 | EpaR | Virulence | ETT2 | Protein | 6e-84 | 100 |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-41 | 48 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-41 | 48 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 5e-42 | 48 |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-40 | 47 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 5e-31 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| APECO78_17965 | YP_007382758.1 | type III secretion protein EpaR | VFG0549 | Protein | 2e-42 | 48 |
| APECO78_17965 | YP_007382758.1 | type III secretion protein EpaR | VFG1014 | Protein | 1e-35 | 43 |
