|
Name : APECO78_17920 (APECO78_17920) Accession : YP_007382749.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Virulence Product : type III secretion system lipoprotein EprK Function : - COG functional category : - COG ID : - EC number : - Position : 3730092 - 3730826 bp Length : 735 bp Strand : - Note : COG4669 Type III secretory pathway, lipoprotein EscJ DNA sequence : ATGAAATATATATCATTATTATTGTTTATCCTGCTGTTGTGCGGCTGCAAGCAGCAGGAATTATTGAACCATCTTGATCA ACAGCAAGCTAATGATGTCCTTGCTGTTTTACAAAGACATAATATTAATGCTGAAAAGAAGGATCAAGGCAAAACAGGAT TTTCAATATTTGTCGAACCAACGGATTTTGCTTCTGCGGTGGATTGGCTAAAAATCTACAATCTACCGGGTAAGCCTGAT ATTCAAATATCGCAGATGTTCCCTGCAGATGCACTCGTTTCATCTCCACGAGCGGAAAAAGCAAGGCTATATTCTGCTAT TGAGCAGCGGTTAGAGCAATCTCTCAAAATTATGGATGGCATTATTTCTTCGAGAGTACATGTTAGTTACGATGTTGATA ATGGCGATAGTGGTAAAACTGCTTTACCAATTCATATTTCTGTACTTGCAGTATATGAAAAAGATATCAACCCAGAAATA AAAATAAATGATATCAAGAGATTTATTGTTAATAGCTCTGCAAGCGTACAATATGAAAATATTTCTGTTGTATTGTCAAA ACGAAGAGACATTATTGAGCAAGCACCAACATATGAAATTAGCGAACCTGTTTTTGCTTATGATAAGGCTATGCCGGTTT CTATCTTACTTGCATTAATATCCGTAGCGACTTGCTGGCTGTTATGGAAGTATAGGGCCATTCTAACTAATTTAGTCAGG TTGAAAATTAAGTAG Protein sequence : MKYISLLLFILLLCGCKQQELLNHLDQQQANDVLAVLQRHNINAEKKDQGKTGFSIFVEPTDFASAVDWLKIYNLPGKPD IQISQMFPADALVSSPRAEKARLYSAIEQRLEQSLKIMDGIISSRVHVSYDVDNGDSGKTALPIHISVLAVYEKDINPEI KINDIKRFIVNSSASVQYENISVVLSKRRDIIEQAPTYEISEPVFAYDKAMPVSILLALISVATCWLLWKYRAILTNLVR LKIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| eprK | AAZ31284.1 | EprK | Virulence | ETT2 | Protein | 2e-106 | 100 |
| ECs3716 | NP_311743.1 | EprK | Not tested | LIM | Protein | 6e-105 | 99 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 4e-53 | 55 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 4e-53 | 55 |
| prgK | NP_457265.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 1e-53 | 55 |
| prgK | NP_806474.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 1e-53 | 55 |
| prgK | AAS66872.1 | PrgK | Virulence | SSR-2 | Protein | 3e-50 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| APECO78_17920 | YP_007382749.1 | type III secretion system lipoprotein EprK | VFG0533 | Protein | 2e-53 | 55 |
| APECO78_17920 | YP_007382749.1 | type III secretion system lipoprotein EprK | VFG0998 | Protein | 8e-43 | 45 |
| APECO78_17920 | YP_007382749.1 | type III secretion system lipoprotein EprK | VFG1787 | Protein | 6e-36 | 42 |
