Gene Information

Name : APECO78_14345 (APECO78_14345)
Accession : YP_007382038.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Virulence
Product : transcriptional regulator MirA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2966580 - 2967311 bp
Length : 732 bp
Strand : +
Note : COG0789 Predicted transcriptional regulators

DNA sequence : 
ATGGCGCTTTACACAATTGGTGAAGTGGCGTTGCTTTGTGATATTAACCCTGTCACGTTACGCGCGTGGCAGAGGCGTTA
CGGGTTGCTGAAACCGCAACGGACAGACGGCGGTCATCGACTGTTCAACGATGCCGATATTGACCGTATCCGCGAGATCA
AACGCTGGATCGACAACGGCGTGCAGGTCAGCAAAGTTAAAATGCTGCTCAGTAATGAAAATGTTGATGTGCAGAACGGC
TGGCGCGATCAGCAAGAAACATTACTGACCTACCTGCAAAGCGGCAATCTGCATAGCCTGCGAACGTGGATCAAAGAGCG
CGGTCAGGATTACCCCGCCCAGACACTCACCACACATCTGTTTATTCCTCTGCGCCGACGACTTCAATGCCAACAACCGA
CTCTCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAA
CAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCACCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCA
ACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGG
TGTGGTGCGGTGAAAATCGAACCTCCGCCCAACAGCAGCAACTCACCAGTTGGCAAGAACAAGGCCATGATATTTTCCCA
CTCGGCATTTAA

Protein sequence : 
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNG
WRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKK
QGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFP
LGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 2e-46 44
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 1e-46 44
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 8e-47 44
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 8e-47 44
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 1e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO78_14345 YP_007382038.1 transcriptional regulator MirA VFG0491 Protein 6e-47 44