Gene Information

Name : APECO78_13875 (APECO78_13875)
Accession : YP_007381946.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2849826 - 2850992 bp
Length : 1167 bp
Strand : -
Note : COG1004 Predicted UDP-glucose 6-dehydrogenase

DNA sequence : 
ATGAAAATCACCATTTCCGGTACCGGCTATGTAGGCTTGTCAAACGGGCTTCTAATCGCACAAAATCATGAGGTTGTGGC
ATTAGATATTTTACCGTCACGCGTTGCTATGCTGAATGATCGGATATCTCCAATTGTTGATAAGGAAATTCAGCAGTTTT
TGCAATCAGATAAAATACACTTTAATGCCACATTAGATAAAAATGAAGCCTACCGGGATGCTGATTATGTCATCATCGCC
ACTCCAACCGACTATGATCCTAAAACTAATTATTTCAATACATCCAGTGTAGAATCAGTAATTAAAGACGTAGTTGAGAT
AAATCCTTATGCGGTTATGGTCATCAAATCAACGGTTCCCGTTGGTTTTACCGCAGCGATGCATAAGAAATATCGTACTG
AAAATATTATTTTCTCTCCGGAATTTCTCCGCGAAGGTAAAGCCCTTTACGATAATCTCCATCCTTCACGTATTGTCATC
GGTGAGAGTTCAGAACGCGCTGAACGTTTTGCTGCGTTGTTACAGGAAGGGGCGATTAAGCAAAATATCCCGACCCTGTT
TACCGACTCCACTGAAGCAGAAGCGATAAAACTTTTCGCTAATACCTATCTGGCGATGCGCGTAGCGTACTTTAATGAAC
TGGATAGCTATGCAGAAAGTTTAGGTCTGAATACTCGCCAGATTATCGAAGGCGTTTGTCTCGATCCGCGTATTGGCAAC
CATTACAACAATCCGTCGTTTGGTTATGGTGGTTATTGTTTGCCGAAAGATACCAAACAGTTACTGGCGAATTATCAGTC
TGTGCCGAATAACCTGATTTCGGCAATTGTCGATGCTAACCGCACGCGTAAAGATTTTATTGCCGATGCCATTTTGTCAC
GCAAGCCGCAAGTGGTGGGTATTTATCGTCTGATTATGAAGAGCGGTTCAGACAACTTCCGCGCGTCTTCCATTCAGGGG
ATTATGAAACGTATCAAGGCGAAAGGCGTTGAAGTCATCATTTACGAACCGGTGATGAAAGAAGACTCATTCTTCAACTC
TCGCCTGGAACGAGATCTCGCCACTTTCAAACAACAAGCTGACGTCATTATCTCCAATCGTATGGCAGAAGAGCTTAAGG
ATGTGGCAGATAAGGTATACACCCGCGATCTCTTTGGCAGTGACTAA

Protein sequence : 
MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA
TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI
GESSERAERFAALLQEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQG
IMKRIKAKGVEVIIYEPVMKEDSFFNSRLERDLATFKQQADVIISNRMAEELKDVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-92 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO78_13875 YP_007381946.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 2e-102 55