Gene Information

Name : APECO78_13670 (APECO78_13670)
Accession : YP_007381905.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2800050 - 2800934 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAAATTAAGCAGTGAAATGAAGGCGCTGGCGAAGAAAGCGGGCGGCAGCTTTAAAACAGTGAATGACCGTATCCA
TATTACAAAACGGTTCAGTGAACATTTACGGGCGCTGAATATCCAGATCCAGAGGGTGGAGCAGATCAGGGTTCGCCATA
TCGAATGCTACATTGAGGAACGGCTGGAGCAGGATATTGGTTTACGAACGCTGCAAAACGATATGGCGGCACTGCAGGCC
GTGCTGAGACAGGCTGGACGCAGGCAGGTGGTGGAGCATCCGCGCCTGACCAATAAGGCGCTGGGAGTGTCGGGCGCTTC
ACGCAACGGTACGCGCCGCGCCATTACGCCGGAACATTACCAGCAGGTTATGGAGAAAGCCCGCGCTGAGGATGCGGGGC
TGGCTGCGGCGCTGGAGATCGCGCGACTGATGGGGTTACGCTCGCAGGAAGCGGTACAGAGTTCACTGTCGCTGAAAACG
TGGCTGAAAGCCATTGAGCGCGGGGAAAACCGGCTGAAAGTGGTGTTTGGCACCAAAGGTGGGCGTCCCCGCCATACGAC
AGCTCTGGATACTGGCGCAGTCAGGAAAGCCCTTGAAAAAGCGTTAATTGTAGCAGAACAACACAATGGCAGGCTGATCG
ACAAGCCTGATCTCAAAATGGCGCTGGAGAGCTGGCACAAACAGGTCATTAAGGTGGGGCTGAAGGGGGAATTTTCCCCT
CACTCCCTGCGCTATGCCTGGGCGCAGGATGCGATCCGCCATTATCTGGCGCAGGGATTCAGCGAAAAGGAATCCCTGGC
GCTGACGGCGACGGATCTGGGTCATGGCGACGGGCGCGGGCGTTGGGTGAAACAGGTGTATGGCTACCGCTGGAAGAGGG
AATGA

Protein sequence :
MSKLSSEMKALAKKAGGSFKTVNDRIHITKRFSEHLRALNIQIQRVEQIRVRHIECYIEERLEQDIGLRTLQNDMAALQA
VLRQAGRRQVVEHPRLTNKALGVSGASRNGTRRAITPEHYQQVMEKARAEDAGLAAALEIARLMGLRSQEAVQSSLSLKT
WLKAIERGENRLKVVFGTKGGRPRHTTALDTGAVRKALEKALIVAEQHNGRLIDKPDLKMALESWHKQVIKVGLKGEFSP
HSLRYAWAQDAIRHYLAQGFSEKESLALTATDLGHGDGRGRWVKQVYGYRWKRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 4e-77 65
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 4e-77 65
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 9e-67 60
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 9e-67 60
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 7e-58 50
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 3e-63 49
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 1e-59 48
api85 CAF28559.1 putative integrase Not tested YAPI Protein 1e-38 47
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 5e-51 42
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 5e-51 42