Gene Information

Name : APECO78_07470 (APECO78_07470)
Accession : YP_007380669.1
Strain : Escherichia coli APEC O78
Genome accession: NC_020163
Putative virulence/resistance : Unknown
Product : lysozyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1536003 - 1536500 bp
Length : 498 bp
Strand : +
Note : COG3772 Phage-related lysozyme (muraminidase)

DNA sequence :
ATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATTACTGG
CCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACGTACCATACAAAGATATCGTTGGCGTATGGACTGTATGTCACG
GACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCC
ACTGTCGCCAGACAAATTAACCCGTACATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTA
CAACGTGGGTGCTGGCAATTTCAGAACATCGACGCTTCTTCGCAAAATAAACCAGGGCGATATCAAAGGCGCATGTGATC
AGCTACGTCGCTGGACATATGCTGGCGGTAAGCAATGGAAAGGTCTCATGACTCGTCGTGAGATTGAGCGTGAAATCTGT
TTGTGGGGTCAGCAATGA

Protein sequence :
MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYVPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLA
TVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREIC
LWGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03062 YP_001439127.1 hypothetical protein Not tested Not named Protein 5e-36 60