|
Name : APECO78_07110 (APECO78_07110) Accession : YP_007380597.1 Strain : Escherichia coli APEC O78 Genome accession: NC_020163 Putative virulence/resistance : Virulence Product : chaperone, PapD family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1467262 - 1467993 bp Length : 732 bp Strand : - Note : COG3121 P pilus assembly protein, chaperone PapD DNA sequence : ATGACATTTATGAAAGGACTACCCCTTTTGTTGTTGGTTGCCAGTCTGTGCAGCCACGCTGCACTACAACCCGATCGCAC TCGTATTGTGTTTAACGCTAATGATAAAGCTACCAGTCTGCGGGTGGATAATCGTAGCGATAAACTCCCCTACCTCGCTT ATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGATGATCTTCTGGTCGCCCTGCCGCCGATACAACGTCTGGAACCG AAAGCAACAACGCAGGTACGGATAGTAAAGCAAGCCTCGACCACAAAATTACCGGGCGATCGCGAAACGCTATTTTTCTA CAATATGCGTGAAATTCCTCCCGCCCCGGAAAAAAACAGCGACCATGCCGTTCTGCAAGTCGCCATTCAGAGTCGTATCA AGGTGTTCTGGCGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTGCAGTTACAGGTCAGCCAGCAGGGC AACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTACCTGGGACGAAATGAAAAAGGCGTTCTCCC CGGCTTCAAAACCGTGATGGTTGCGCCTTTTAGTACGGTCAACACAAACACCGGAAATTATAGCGGCAGCCAGTTTTATC TCGGTTATATGGATGATTACGGCGCGTTACGCATGACGACGCTCAACTGCAGCGGACAATGCCATTTACAAGCCGTGGAG GCGAAGAAATGA Protein sequence : MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEP KATTQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGNYSGSQFYLGYMDDYGALRMTTLNCSGQCHLQAVE AKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 2e-33 | 42 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 4e-38 | 42 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 6e-38 | 42 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 5e-38 | 42 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 8e-38 | 42 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 7e-38 | 42 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 7e-38 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| APECO78_07110 | YP_007380597.1 | chaperone, PapD family protein | VFG0885 | Protein | 1e-33 | 42 |
| APECO78_07110 | YP_007380597.1 | chaperone, PapD family protein | VFG1547 | Protein | 3e-38 | 42 |
| APECO78_07110 | YP_007380597.1 | chaperone, PapD family protein | VFG0896 | Protein | 3e-38 | 42 |
