Gene Information

Name : wbpP (DDD_3560)
Accession : YP_007378708.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Virulence
Product : UDP-glucose 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.2
Position : 3835376 - 3836344 bp
Length : 969 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAACAACCTATTAATTACAGGAGCAGCAGGTTTCATAGGTAGTAATTTATCAGAATACTTTTGTAAAAAAGGTTA
CGATGTTTTAGCTCTTGATAATCTTTCTACTGGTCATTTTAAGAATATTGAGCATCTAGCAAGCTATCCTAATTTTAAAT
TTATTGAAGGAGATATTAGAGATGTAACAACATGTGATGCAGCTGTTAAAGGAAGAGATTTTGTTATGCATCAAGCGGCG
TTAGGAAGCGTGCCAAGGTCACTCAAAGATCCTATAACCTCTAACGAAGTTAACGTTGGAGGTTTCTTGAATATGCTAGT
CGCTTCTAATAACGCAGGAGTTAAAAAAATGATTTACGCTGCAAGTTCTTCTACCTATGGAGATTCTCAGGAACTACCTA
AGAAGGAAGGGATTATAGGTAAGCCTTTATCCCCTTATGCTGTTACTAAATTTGTTAACGAGCTATATGCTGGTGTTTTT
TATAAATCTTATGGGTTTAATGCGATAGGTTTACGTTATTTTAATGTTTTTGGTAGAAAACAAAGTCCCGAAGGCGCTTA
TGCCGCAGTAATACCTCTTTTTACAAAAAAGCTTATGAACAAAGAATCTCCAATTATTAATGGTGATGGTTCTTTTTCAC
GCGATTTTACCTATATAGATAATGTGATTCAAGCTAACGAAAGAGCAATGCTTTCTACTAACCCTAAATCAGCTAATAAT
ATTTTTAATGTAGCGTGCGGAGAACAAACCGATTTGAATTCCTTAGTTGACCTACTTAAAGAAGCTCTTTCTCGATATGA
TGAGTCAATAAAAGATGTCGAGGTTATTTACGGTCCTACAAGAGATGGAGATATACCACATTCATTAGCCTCCATCCAGA
AAGCAAAAGAAATCATTGAGTATGACCCTAAATACGATATCAAAAAAGGGCTAAATCTGGCAGTAGATTGGTATTGGAAT
AATTTGTAA

Protein sequence : 
MKNNLLITGAAGFIGSNLSEYFCKKGYDVLALDNLSTGHFKNIEHLASYPNFKFIEGDIRDVTTCDAAVKGRDFVMHQAA
LGSVPRSLKDPITSNEVNVGGFLNMLVASNNAGVKKMIYAASSSTYGDSQELPKKEGIIGKPLSPYAVTKFVNELYAGVF
YKSYGFNAIGLRYFNVFGRKQSPEGAYAAVIPLFTKKLMNKESPIINGDGSFSRDFTYIDNVIQANERAMLSTNPKSANN
IFNVACGEQTDLNSLVDLLKEALSRYDESIKDVEVIYGPTRDGDIPHSLASIQKAKEIIEYDPKYDIKKGLNLAVDWYWN
NL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-71 54
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-71 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpP YP_007378708.1 UDP-glucose 4-epimerase VFG0430 Protein 1e-71 54