Gene Information

Name : DDD_3536 (DDD_3536)
Accession : YP_007378684.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3809837 - 3810400 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence : 
ATGTATTTACTGTTCAAGCGTTTTTTTGATATAGTGTTATCAATTCTTTTACTTATAATATTACTGCCTCTTTTTACGGT
TATCGCTTTAATTATTTATATTCAAGATTTTGGTACTCCTATTTTTAAACAAAAAAGACTGGGTAAAAATGGTGAAGAAT
TTCTTTTTTACAAATTTAGAAGTATGCCACTTGATACTCCTGACTTAGAGTCAAAAGAAAGAGATAAACTAGAAATCACT
CCGTTTGGTACTTTTATAAGGCGCACAAATCTAGATGAACTACCTCAATTTTTTAATGTACTTGTAGGCGATATGAGTTT
TATAGGCCCTAGACCACCTATATTGAAACAACTTTCATTAATTAAATTGAGAAAAGAAAATGGTTCGTTAAATTTAAGAC
CTGGGTTAACTGGATGGGCTCAAGTTAATTCTTATGATAACATGCCCGAGAATATTAAAGCAAAATTTGACGGCGAGTAC
TACGACAAAATTTCTTTAAAAATGGATTTAAAAATTCTTTTAAAGACTGTAGTTTACTTTACTAAAAAACCACCAACATA
TTAA

Protein sequence : 
MYLLFKRFFDIVLSILLLIILLPLFTVIALIIYIQDFGTPIFKQKRLGKNGEEFLFYKFRSMPLDTPDLESKERDKLEIT
PFGTFIRRTNLDELPQFFNVLVGDMSFIGPRPPILKQLSLIKLRKENGSLNLRPGLTGWAQVNSYDNMPENIKAKFDGEY
YDKISLKMDLKILLKTVVYFTKKPPTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-21 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DDD_3536 YP_007378684.1 capsular polysaccharide synthesis protein VFG1369 Protein 2e-27 45
DDD_3536 YP_007378684.1 capsular polysaccharide synthesis protein VFG1309 Protein 2e-22 44