Gene Information

Name : DDD_3480 (DDD_3480)
Accession : YP_007378628.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Resistance
Product : ABC-type transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3734367 - 3735029 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
TTGGGAAAGACTTATTCTAGTGGTCAAAAAGAATTAACAGTCCTACAAGATATTTCCTTTGAAGTAGAGAAAGGTCAGAG
CTTTTCTATTGTTGGACCTTCGGGAAGTGGAAAAACTACTCTCTTAGGCTTGTGTGCAGGACTCGATGATCCCAATACTG
GAAGCGTAGAGTTATGTGGTCAAGATTTAAGTCTTTTGGATCAAGATCAAAAAGCCCAACTAAGAAATAAAGAAGTAGGT
TTTATTTTTCAAAATTTTCAATTGTTGCCAACTCTTACTGCTTTAGAAAACGTGAGCGTTCCCTTAGAGTTGCAAGGAGA
TCAATCAGCTACTCAAAAGAGTATTACTTTACTAGAGAAAGTAGGTCTAGGTGAACGTGCAGACCATTATCCTACTCAGC
TCTCCGGTGGTGAACAACAGCGAGTGGCTTTAGCGAGAGCTTTTGCAAATGCACCTTCTATTTTATTTGCCGATGAGCCT
ACAGGGAATCTTGATGAAGAAACCGGAGAAAAAGTCATCCAATTGTTATTTGAATTGAATAAGGAGGCAGGAACGACGCT
GGTGATTATTTCGCACGATTTAGAATTAGCCCGTAGGACGCAGCAAATATTACGTCTTAAAGGTGGTCAAATTTTAACTA
ATGAACGCACCAAGGTGCAGTAA

Protein sequence : 
MGKTYSSGQKELTVLQDISFEVEKGQSFSIVGPSGSGKTTLLGLCAGLDDPNTGSVELCGQDLSLLDQDQKAQLRNKEVG
FIFQNFQLLPTLTALENVSVPLELQGDQSATQKSITLLEKVGLGERADHYPTQLSGGEQQRVALARAFANAPSILFADEP
TGNLDEETGEKVIQLLFELNKEAGTTLVIISHDLELARRTQQILRLKGGQILTNERTKVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DDD_3480 YP_007378628.1 ABC-type transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-41 46
DDD_3480 YP_007378628.1 ABC-type transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-36 45
DDD_3480 YP_007378628.1 ABC-type transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-34 43