Gene Information

Name : smpB (DDD_2838)
Accession : YP_007377986.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3071318 - 3071782 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence :
ATGGAATTTAAGAACAAAATAGAGATCAAGAATCGCAAAGCGCGGTTTGAATACGAGATACTGGACAAGTATACGGCAGG
AATTGTACTGGCTGGAACTGAAATTAAAGCCATACGATTAGGAAAAGCGAGTATTGCCGAAGGCTTTTGTGAGTTTCAAA
ATAATGAGCTGTTTATTATTAACATGACGGTTCAAGAATATTCTCATGCCACCTATTTTAATCACCAGCCGAAACAAGAA
CGCAAGCTTTTATTGAACCGCAAGGAACTTAAAAAGTTAGAAAAAGCCGTCGCAAATACTGGTAACACGATTATTCCATT
AAAACTTTTTGTCAATAAAAAAGGATTGGCAAAATTAGATATCGCTCTTGCAAAAGGGAAAAAGTTATACGACAAGAGAG
AAACTTTAAAAGACCGCGATAACAAACGCAGGCTCGATGCGGTGAAGAAACAATTCCGCACCTAG

Protein sequence :
MEFKNKIEIKNRKARFEYEILDKYTAGIVLAGTEIKAIRLGKASIAEGFCEFQNNELFIINMTVQEYSHATYFNHQPKQE
RKLLLNRKELKKLEKAVANTGNTIIPLKLFVNKKGLAKLDIALAKGKKLYDKRETLKDRDNKRRLDAVKKQFRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-18 46
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-19 45
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-12 43