Gene Information

Name : DDD_2532 (DDD_2532)
Accession : YP_007377680.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Virulence
Product : ABC-type transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2744569 - 2745279 bp
Length : 711 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAATATGATCACCATTACAGACTTAGAAAAGTATTACGTTACAGAAGAAGTGCGTACGGTAGCCTTAAACAAGCT
CTCCTTTTCTGTACAAGAAGGAGAATTTGTCGCTATCATGGGACCTTCTGGTTGCGGTAAATCTACCTTGCTTAATATTT
TAGGATTGCTGGACGATCCTGACGGCGGCAGCTTTGTCTTTAACGATATCGAGGTTTCTGGTTTTAACGAGCGTAAAAGA
GCAGATTTGAGAAAACATAACATCGGTTTTGTATTTCAAAGTTTTAACCTCATCGATGAATTGACCGTTTTTGAAAACGT
AGAATTACCACTGATCTACACTGGAGTAAAGCCAGCAGAACGTAAAAAACGCGTGGATGAAGTACTAGAAAAAATGCAAA
TCATGCACAGACGCAAGCATTTTCCACAACAACTTTCTGGTGGACAGCAGCAAAGAGTAGCTGTAGCAAGAGCCGTTGTA
AACAATCCAAAATTAATCCTCGCCGATGAACCTACTGGAAATCTAGACAGCAGTAATGGTAATGAGGTAATGGATTTACT
TACTGAGTTGAACGCCGCTGGAACTACCATAGTGATGGTAACGCACAGCGAGCACGATGCCAAATACAGTCACAGAATCA
TAAGAATGCTGGACGGTCAGAAAGTGACAGAAAACATCCTAGCAGACTATAAAAGCGGTGTGCAAGTATAA

Protein sequence : 
MNNMITITDLEKYYVTEEVRTVALNKLSFSVQEGEFVAIMGPSGCGKSTLLNILGLLDDPDGGSFVFNDIEVSGFNERKR
ADLRKHNIGFVFQSFNLIDELTVFENVELPLIYTGVKPAERKKRVDEVLEKMQIMHRRKHFPQQLSGGQQQRVAVARAVV
NNPKLILADEPTGNLDSSNGNEVMDLLTELNAAGTTIVMVTHSEHDAKYSHRIIRMLDGQKVTENILADYKSGVQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DDD_2532 YP_007377680.1 ABC-type transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-46 49
DDD_2532 YP_007377680.1 ABC-type transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-36 47
DDD_2532 YP_007377680.1 ABC-type transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-32 46
DDD_2532 YP_007377680.1 ABC-type transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-31 43
DDD_2532 YP_007377680.1 ABC-type transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DDD_2532 YP_007377680.1 ABC-type transporter ATP-binding protein VFG2059 Protein 3e-13 41