Gene Information

Name : DDD_2305 (DDD_2305)
Accession : YP_007377453.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Virulence
Product : sugar phosphate isomerase, KpsF/GutQ family, involved in capsule expression
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.13
Position : 2511995 - 2512960 bp
Length : 966 bp
Strand : -
Note : -

DNA sequence :
TTGGAACAAGAAAATAAAATTTTAGAAGTAGCAAAAAGAACCATTAGAACTGAAGCACAAGCGGTTACAGATCTCGTAAA
TGGTATCGATATCGCTTTCGCGAAAGCGGTATTACACATACACAACTCTCAAGGCCGAGTTATCATCACTGGAATAGGCA
AAAGTGCGATCATTGCTCAAAAAATAGTAGCAACAATGAACTCTACAGGAACTCCTGCTATATTCATGCACGCCGCAGAT
GCTATTCACGGAGATTTAGGAATTGTACAAACTAATGATGTGGTCATTTGTATCTCTAAAAGCGGTAACACGCCAGAAAT
TAAAGTCCTTGTTCCTCTTATCAAGAATTTTAAAAACAAGCTCATTGCCATAACGAGCAATAAAGATTCTTTTCTTGGTA
TAGCTGCAGATTATATTTTACATGCTGCTATTCAAGAAGAAGCTTGTCCCAATGGTCTTGCTCCTACTACGAGTACGACC
GTACAACTAGTTATAGGAGATGCTCTAGCGATAAGTCTATTAGAGTTAAAAGGTTTTACTGATAAAGATTTTGCTCGATA
CCATCCAGGCGGTGCTTTGGGGAAAAAATTATATTTAAGAGTACAAGATTTAGCTGAGAAAAATAACAAACCACAAGTAC
TTGCATCCACTTCTTTGAGAGACGTCATTGTGAACATTTCAGAAAACATGCTAGGAATGACGGTAGTTACAGCAGATAAT
AAAGCTGTAGGTATTATTACTGACGGTGATTTGAGACGTATGCTTTCTAGCGGTAAAAACATAGATTACCTTCACGCTAG
TGATATTATGAGCGGTAATCCCAAAACGATTAAAGCATCTTCCATGGCTGTAAAAGCTAGAGAAATGATGGAAGAATTCA
ATATATCCCAATTGATCTCAGTAGATGATAAAGGCTACTCAGGTGTTGTGCACATTCACGATTTAATAAGAGAAGGAATC
ATTTAA

Protein sequence :
MEQENKILEVAKRTIRTEAQAVTDLVNGIDIAFAKAVLHIHNSQGRVIITGIGKSAIIAQKIVATMNSTGTPAIFMHAAD
AIHGDLGIVQTNDVVICISKSGNTPEIKVLVPLIKNFKNKLIAITSNKDSFLGIAADYILHAAIQEEACPNGLAPTTSTT
VQLVIGDALAISLLELKGFTDKDFARYHPGGALGKKLYLRVQDLAEKNNKPQVLASTSLRDVIVNISENMLGMTVVTADN
KAVGIITDGDLRRMLSSGKNIDYLHASDIMSGNPKTIKASSMAVKAREMMEEFNISQLISVDDKGYSGVVHIHDLIREGI
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-48 42
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-48 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 4e-48 42