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Name : lysS (DDD_2218) Accession : YP_007377366.1 Strain : Nonlabens dokdonensis DSW-6 Genome accession: NC_020156 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2419035 - 2420723 bp Length : 1689 bp Strand : - Note : - DNA sequence : ATGCAACTTTCTGAACAAGAAATCGTACGCCGTGAGAAACTCGGCAAACTGCGTGCTATGGGAATAGATCCTTATCCAGC AGCTCTTTATCCTGTAGATACTACGTCTAAAAAGATTAAAGCCGATTTCAAAGAAGGTAAACAGGTTGTCATCGCAGGTC GCTTGATGGCGATTAATATTCAAGGTAAAGCATCTTTTGCGCAGTTACAAGACAGCGATGGTCGCATCCAGTTGTATTTT AATAGAGATGAGATTTGCCCTGGTGAAGATAAAACCATGTATAATGATGTCTTTAAAAAGCTCTTAGACCTTGGTGATTT CGTGGGAATTAAAGGGGAACTTTTCACCACACAAGTGGGAGAAAAAACCGTTTTAGTCAAGAATTTTGAATTACTAAGTA AATCTTTGAAACCATTACCTATTCCTAAGCAAAAAGACGGAAAAGTTTATGACGCATTCACTGATCCAGAAACACGTTAC AGACAACGCTATGCAGACCTTGCTGTGAATCCGCAGGTGAAGGAAGTTTTTGTTAAAAGAACTAAGCTTTTTAACGCTAT GCGATCGTTTTTTAATGAGCGTGAGTATTTTGAGGTAGAAACTCCTATTTTACAGCCTATTCCAGGTGGAGCAGCTGCTC GTCCATTCATGACACATCATAACTCGCTAGACATACCACTTTATATGCGTATCGCAAACGAGTTGTATTTGAAGCGATTG ATCGTAGGCGGATTTGATGGCGTGTATGAGTTCAGTAAAAACTTCCGTAATGAAGGAATGGATCGTACTCACAATCCAGA GTTTACCGCCATGGAAATTTATGTGGCTTACAAAGACTACAACTGGATGATGGACTTTACAGAAGAATTGCTCGAGAGTT GTGCAGTAAGTGTTAATGGAACGACTACTAGCCAATTTGGCGAGCACACTATAGAATGGAAAGCTCCTTATCCTAGAGTC ACTATGCGTCAATCGATTATTGATTTCACTGGTTTTGATATCGATGGAAAAAGTGAGGAAGAGTTGTACGCTTTCGCGAA AGCGGAAAAAATAGACGTAGACGCTACCATGGGAAAAGGAAAGTTAATTGATGAGATCTTTGGCGAGAAATGTGAAGGCA ACTACATACAGCCTACGTTTATCACAGATTATCCTAAGGAAATGTCACCGCTATGTAAGCAACACAGAGACAATCCAGAA CTTACAGAGCGATTTGAACTGATGGTTTGCGGTAAGGAAATTGCCAACGCTTATTCAGAGCTGAATGATCCTATAGATCA AAGAGAACGCTTTGAAGCGCAACTTAAACTTGCCGATAGAGGAGATGATGAGGCAATGTTTATCGATCAAGATTTCTTAC GAGCTTTAGAGTATGGGATGCCACCTACCTCTGGTTTAGGAATAGGTATGGACCGATTGATTATGTATTTAACTAACAAT CCATCGATTCAAGAGGTGTTATTCTTTCCACAAATGAAACCAGAAAATACGGTTTCAGTAGAATTAAATGACGAAGAGCA ATTGGTTTTTGATCTTCTGAAAAAAGAAGAAAAAATGGATCTCAACGTTCTTAAAGAACAAGCTGGATTGAGTAATAAAA AATGGGACAAATCCATTAAAGGATTGACCGGTAAAACAGTGGCCAAAGTCGAAAAAACAGAAGAAGGATTATTTGTGAAA ATCCTTTAA Protein sequence : MQLSEQEIVRREKLGKLRAMGIDPYPAALYPVDTTSKKIKADFKEGKQVVIAGRLMAINIQGKASFAQLQDSDGRIQLYF NRDEICPGEDKTMYNDVFKKLLDLGDFVGIKGELFTTQVGEKTVLVKNFELLSKSLKPLPIPKQKDGKVYDAFTDPETRY RQRYADLAVNPQVKEVFVKRTKLFNAMRSFFNEREYFEVETPILQPIPGGAAARPFMTHHNSLDIPLYMRIANELYLKRL IVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTEELLESCAVSVNGTTTSQFGEHTIEWKAPYPRV TMRQSIIDFTGFDIDGKSEEELYAFAKAEKIDVDATMGKGKLIDEIFGEKCEGNYIQPTFITDYPKEMSPLCKQHRDNPE LTERFELMVCGKEIANAYSELNDPIDQRERFEAQLKLADRGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMYLTNN PSIQEVLFFPQMKPENTVSVELNDEEQLVFDLLKKEEKMDLNVLKEQAGLSNKKWDKSIKGLTGKTVAKVEKTEEGLFVK IL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-94 | 43 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-74 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007377366.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-95 | 43 |
