Gene Information

Name : xerD (DDD_2148)
Accession : YP_007377296.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2361459 - 2362355 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
ATGAACTGGAAGCAAGCCGTAAAAGATTTTGGTATCTACATGCAATTAGAAAGAGGTCTTTCTTTAAATACCATTAAAGC
ATACAAAAGAGACCTCAATAAATTGATTTACTGGCTTGAAGAAAATAAAATTGAAGAATCTCCTTCCATTGTTAATCAAG
ACACCTTGCGTTCTTACATTTATGCCCTTGCAAAATCAGTGCAACCTCGATCACAAGCGCGTTCTATAAGCAGTCTTAAA
GCGTTTTTTGAATTTCTTATTTTAGAACGCTATAGAGAAGATCAACCTATGGAATTGATAGAAACTCCTAAAATAGGTCG
TAAACTTCCAGATACATTAAGCACCAAAGAAATAGATGCACTCATCAATAGCATCGATCGATCTACTCTAGAAGGAGAGC
GCAATCGTGTCATACTTGAGACACTTTACGCTTGCGGGCTGCGCGTGAGCGAGTTGATTACTCTTAAAATAAGCGACTTA
TTCTTTGATGAAGGATTTTTAAAAGTAACAGGAAAAGGCGATAAACAACGATTTGTGCCTATAGGTTCCTACACTATGAA
AATTATAAATACTTACAAAAATGAAGTACGCGTTCATATTCCCGTTAAGTCAGATCATACGGACACCCTTTTTTTAAACA
GAAGAGGCGCTGGACTTACTAGAGCGATGATCTTTCATATTATTAAACAGCAAGCTATCAAAGCTGGTATAGAGAAGACA
ATTAGCCCGCATACTTTTAGACATAGTTTTGCCACGCATTTGCTTGAAAATGGAGCCGATTTACGTTCCATACAAATGAT
GCTGGGACATGAAAGCATCACCACGACTGAGATCTATATGCACGTAGACCGAGTACACCTTGCTAAGGTTATTAACGAGC
ATCATCCTAGAGCTTAA

Protein sequence :
MNWKQAVKDFGIYMQLERGLSLNTIKAYKRDLNKLIYWLEENKIEESPSIVNQDTLRSYIYALAKSVQPRSQARSISSLK
AFFEFLILERYREDQPMELIETPKIGRKLPDTLSTKEIDALINSIDRSTLEGERNRVILETLYACGLRVSELITLKISDL
FFDEGFLKVTGKGDKQRFVPIGSYTMKIINTYKNEVRVHIPVKSDHTDTLFLNRRGAGLTRAMIFHIIKQQAIKAGIEKT
ISPHTFRHSFATHLLENGADLRSIQMMLGHESITTTEIYMHVDRVHLAKVINEHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-50 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-50 46