Gene Information

Name : DDD_2048 (DDD_2048)
Accession : YP_007377196.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2220765 - 2222210 bp
Length : 1446 bp
Strand : -
Note : -

DNA sequence :
ATGGAAATAAAAAACTTCATCAATAATCAAGAAATGATTCCGCTATCGGGAATGTGGCTGGATAACTATGAACCAGCATC
GGGAACAGTTTACGGCGATATCCCAAATTCTAATGAAGATGATGTAGAAAAAGCCTATCAAGCGGCCGCTGCTGCTTTTC
CATCTTGGTCCACAACTACCATTGATGAACGTTCTAAAATCATGTTGCGCATCGCAGACTTGATTGAAGAAAATCTAGAA
GAACTTGCCACTGCCGAAAGTCGTGATAATGGAAAACCACTCTGGCTCGCCAAAGCTGTTGACATCCCGCGAGCGAGTTC
GAACTTTAGATTCTATGGAAATGCGATCACTCAGTACGCGAGCAAGTCTCATGAAAGTGTAGGTAAAAACACGATCAATT
ATACGTTGCGCAAACCTATAGGTGTCGTAGGTTGTATTTCTCCTTGGAACTTGCCTTTATATTTATTTTCTTGGAAAATC
GCTCCAGCCATAGCTGCTGGAAATTGTGTAGTAGCAAAACCTAGTGAGGTGACTCCTGCGACGGCTTATCTATTGGGCAA
GATCGTTAAAAAAGCTGGATTACCAGCTGGAGTTCTCAACATCGTGCATGGAAATGGAGCAAGTTGCGGTCAAGCGATTG
TGGCGCATCCACATATCAAAGCGATCAGTTTTACTGGAGGCACAACTACTGGCGCTCACATCGCAAGAACGGCTGCGCCC
ATGTTTAAGAAATTATCTCTAGAATTAGGCGGTAAGAATCCCAACCTCATCTTTGCCGATTGCGATTATGACAAAATGTT
AGATACAACCGTGCGCTCTTCCTTTGCAAATCAAGGTCAGATTTGTCTTTGTGGTAGTCGCATTTTTGTCCAACAAGAAA
TCTATGAACGATTCAAAAAAGATTTTGTTGATCGTGTGAAAGATCTTAGAGTTGGCCATCCAGAGCAATCTAGCACTAAA
GTCGGTGCGGTAGTAAGTGCTATTCATAGAGAAAAGATTGAAGAGTATCTCGCTTTCGCGAAAGCGGAACCCAAATCCTA
CACCATCTTAACAGGTGGCAATCGAGTAACCGTTGCAAATTTTGAAAACGGTTACTACCTAGAACCAACCGTAATCGAGG
TATCATCAAATGACTGCAAATTGAACCAAGAAGAAATCTTCGGGCCGGTCGTGACCATCATGCCGTTTAAAGATGAAGCG
CACGCACTAGAACTGGCAAATGGCACCAAATACGGACTGAGCGCGACTTTATGGACCAACGATTTATCGAGAACCATGCG
CATGACGCAAGAAATCGATGCAGGAATTGTTTGGGTAAACACGTGGTTGAATCGTGATTTAAGAACACCTTTTGGAGGCG
TGAAAGACAGCGGCGTAGGTCGTGAAGGAGGCTTTGAAGCACTGGACTTTTTTACAGAACCTAAGAATGTTTGTATCGAA
TACTAA

Protein sequence :
MEIKNFINNQEMIPLSGMWLDNYEPASGTVYGDIPNSNEDDVEKAYQAAAAAFPSWSTTTIDERSKIMLRIADLIEENLE
ELATAESRDNGKPLWLAKAVDIPRASSNFRFYGNAITQYASKSHESVGKNTINYTLRKPIGVVGCISPWNLPLYLFSWKI
APAIAAGNCVVAKPSEVTPATAYLLGKIVKKAGLPAGVLNIVHGNGASCGQAIVAHPHIKAISFTGGTTTGAHIARTAAP
MFKKLSLELGGKNPNLIFADCDYDKMLDTTVRSSFANQGQICLCGSRIFVQQEIYERFKKDFVDRVKDLRVGHPEQSSTK
VGAVVSAIHREKIEEYLAFAKAEPKSYTILTGGNRVTVANFENGYYLEPTVIEVSSNDCKLNQEEIFGPVVTIMPFKDEA
HALELANGTKYGLSATLWTNDLSRTMRMTQEIDAGIVWVNTWLNRDLRTPFGGVKDSGVGREGGFEALDFFTEPKNVCIE
Y

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-94 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-75 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-76 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-76 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-76 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-75 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DDD_2048 YP_007377196.1 aldehyde dehydrogenase VFG0082 Protein 1e-75 43