Gene Information

Name : DDD_1664 (DDD_1664)
Accession : YP_007376812.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Virulence
Product : zinc ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1780903 - 1781640 bp
Length : 738 bp
Strand : +
Note : -

DNA sequence : 
ATGGAACAAAAAATTGCAGTTGCCGTAGACGATTTAACTGTTGCTTATAACTATAAGCCAGTACTTTGGGATATAGATTT
ATCTATTCCAGAAGGCGTTTTAATGGCTATTGTAGGTCCTAATGGAGCTGGAAAATCTACCTTGATCAAATCTATTTTGG
GAATTATCGATCCCATAGCAGGATCTGTAAGTATATATGGTAAGCCATATGCAAAGCAACGCGACAAAGTTGCTTATGTA
CCTCAAAAAGGAAGTGTAGATTGGGATTTTCCTACGACTGCGCTAGATGTGGTGATGATGGGAACTTATGGTGCATTAGG
ATGGATCAAAAGACCAGGCGCCAAACAAAAAAAGCAAGCTCTAGAGGCACTTGAAAAAGTAGGAATGCTCGCTTTTAAAG
GAAGACAAATTTCACAACTTTCTGGTGGGCAACAGCAACGTATTTTTCTAGCGAGAGCATTAGTGCAAAATGCAGCAATC
TATTTTATGGACGAGCCTTTTCAAGGAGTAGATGCTACTACCGAAATCGCAATCATCAATATTTTAAAGGAATTACGTAA
AGCTGGTAAAACAGTAATAGTTGTCCATCACGATTTACAAACGGTTCCAGAATATTTTGATTGGGTTACTTTTTTAAATG
TAAAACATATTGCAACTGGTCCAGTAAAAGACATCTTTAATGATGATAATTTGACTAAAACTTATGGAATTAACTATAAA
GTTGCCGTGCAGCAATGA

Protein sequence : 
MEQKIAVAVDDLTVAYNYKPVLWDIDLSIPEGVLMAIVGPNGAGKSTLIKSILGIIDPIAGSVSIYGKPYAKQRDKVAYV
PQKGSVDWDFPTTALDVVMMGTYGALGWIKRPGAKQKKQALEALEKVGMLAFKGRQISQLSGGQQQRIFLARALVQNAAI
YFMDEPFQGVDATTEIAIINILKELRKAGKTVIVVHHDLQTVPEYFDWVTFLNVKHIATGPVKDIFNDDNLTKTYGINYK
VAVQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-45 48
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-45 48
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-48 42
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-47 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-47 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-46 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DDD_1664 YP_007376812.1 zinc ABC transporter, ATP-binding protein BAC0400 Protein 5e-75 64
DDD_1664 YP_007376812.1 zinc ABC transporter, ATP-binding protein BAC0440 Protein 1e-47 43
DDD_1664 YP_007376812.1 zinc ABC transporter, ATP-binding protein BAC0350 Protein 5e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DDD_1664 YP_007376812.1 zinc ABC transporter, ATP-binding protein VFG0526 Protein 4e-48 42