Gene Information

Name : metC (DDD_1129)
Accession : YP_007376277.1
Strain : Nonlabens dokdonensis DSW-6
Genome accession: NC_020156
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1215986 - 1217134 bp
Length : 1149 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATTTAATACTAAGGTCATTCATGGAGGTCAAGAGAATATTGATCCCGCTTACAACGCAGTCATGCCACCTATTTA
CCAAACGACTACTTTTAAACAGGCGAGTCATGGAGCGCATCAAGACTTTGAGTACGCTCGTAGTGGCAATCCTACTAGAG
CTGCTCTGGAGAAAGCATGTGAGAGTATTGAAAACGGTAACTATGGTATTTCCTTTAGTTCTGGACTTGCTGCAATTGAT
GCTATTTTAAAATTACTGGAGCCTGGAGATGAGGTGATTTCTACAGGCGATCTTTATGGTGGTAGCTATAGGTTGTTTGA
TAAGATTTTTAAGAATTTCGGAATCAAGTTTCATTTTGTAGAAATGAAAAATGTAGCTGCTATAAACGATTACATTAATG
AGAAAACAAAATTAGTATGGATAGAAACACCTACTAACCCCATGATGAATATTATAGACATTGTAGCAGCAGCAAAGATC
ACTCAAAATCACAACCTACTTCTCGCTGTAGACAATACTTTTGCCACTCCTTATTTGCAGAATCCGTTGGACTTAGGAGC
AGATATCGTGATGCACAGTGCAACAAAATATCTAGGCGGCCACAGTGATGTTGTACAAGGCTGTCTGGTAGTAAATGATA
AATCTCTAGCTAACAAATTGTATTTTATACAAAATGCAAGCGGTGCTGTTCCTGGACCTCAAGATTGTTTTCTAGTGCTG
CGAGGTATCAAAACCCTACATGTGCGTATGCAGCGTCATTGTGAAAATGGTAGAGCAGTCGCTCAATTTTTAAAAACGCA
TCCTAAAGTAGATCATGTATTCTGGCCTGGATTTACAGAGCATCCCAATCATTTGATAGCAAAGTCTCAAATGAGAGATT
ATGGTGGTATGGTTTCATTTACTACTAAACTTGGTACCATAGAAAGTGCCATTCAGGTGATTGAGAACCTAAAAGTCTTC
ACTCTAGCGGAGTCACTAGGTGGTGTAGAATCTCTAGCTGGTCATCCTGCAACTATGACTCATGCAAGTATCCCCAAAGA
AGATCGTGAAAAAGCGGGAATCGTAGATGCTTTGATACGACTAAGTGTAGGAATAGAAGACGTAGACGATCTATTAGAAG
ACCTTGATCAAGCGCTTCTAATAATTTAA

Protein sequence : 
MKFNTKVIHGGQENIDPAYNAVMPPIYQTTTFKQASHGAHQDFEYARSGNPTRAALEKACESIENGNYGISFSSGLAAID
AILKLLEPGDEVISTGDLYGGSYRLFDKIFKNFGIKFHFVEMKNVAAINDYINEKTKLVWIETPTNPMMNIIDIVAAAKI
TQNHNLLLAVDNTFATPYLQNPLDLGADIVMHSATKYLGGHSDVVQGCLVVNDKSLANKLYFIQNASGAVPGPQDCFLVL
RGIKTLHVRMQRHCENGRAVAQFLKTHPKVDHVFWPGFTEHPNHLIAKSQMRDYGGMVSFTTKLGTIESAIQVIENLKVF
TLAESLGGVESLAGHPATMTHASIPKEDREKAGIVDALIRLSVGIEDVDDLLEDLDQALLII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-82 49
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-83 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC YP_007376277.1 cystathionine beta-lyase BAC0207 Protein 4e-67 41