Gene Information

Name : Cst_c27670 (Cst_c27670)
Accession : YP_007374320.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020134
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2957195 - 2957932 bp
Length : 738 bp
Strand : -
Note : -

DNA sequence : 
ATGATACATATAGAAAACCTGTATAAGGTATACAGGAATGGTTCAATATCGGTTGAAGCATTAAAAGGCATAAATCTTCA
TGTGGATGAAGGCGAGTTTGTGGCCATAATGGGGCCTTCGGGGTCGGGAAAGTCAACACTGATGAATATTATCGGTTGTC
TTGATAGAATGACATCAGGGATGTATACTTTGAATAATATTGATATATCAAAGCTGTCTGCTTATGAGCTTGCGAAAATA
AGAAACCACCAAATAGGATTTGTTTTTCAGACATTTAATCTTTTGCCGAGAATGACTGCACTGAAAAATGTGGAGCTTCC
GATGATTTATGCAGGAGTACCGGCTAAAAAACGCCGTGAAAGGGCAATTGAAGCCTTGGCGAAGGTTGACCTGCTTGAAA
GAATGAACCATCGGCCGAATGAACTTTCGGGGGGTCAGCGTCAAAGGGTTGCAATAGCCCGTGCCCTCGTAAACAATCCA
AGTATCATCCTTGCGGATGAACCTACCGGTAACCTTGACAGCAAATCTGGTGAGGAAATCATGAGTGTTTTCCAGAAGCT
CAACCGCGAAGGCGTTACAATAGTATTGGTTACCCATGAACCCGATATAGCGCAGCATACTAAAAGAGTCGTGACTTTCA
GAGACGGAAAAATTATAAGCGACGAACCGGTGAAAAACCCTGTGGATGCCGAAAGTGTCCTGAAAACAATGGTGGAAAAG
AACATTATATATCAGTGA

Protein sequence : 
MIHIENLYKVYRNGSISVEALKGINLHVDEGEFVAIMGPSGSGKSTLMNIIGCLDRMTSGMYTLNNIDISKLSAYELAKI
RNHQIGFVFQTFNLLPRMTALKNVELPMIYAGVPAKKRRERAIEALAKVDLLERMNHRPNELSGGQRQRVAIARALVNNP
SIILADEPTGNLDSKSGEEIMSVFQKLNREGVTIVLVTHEPDIAQHTKRVVTFRDGKIISDEPVKNPVDAESVLKTMVEK
NIIYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cst_c27670 YP_007374320.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-64 62
Cst_c27670 YP_007374320.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-47 47
Cst_c27670 YP_007374320.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-36 45
Cst_c27670 YP_007374320.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-37 41