|
Name : lysS (Cst_c24150) Accession : YP_007373985.1 Strain : Clostridium stercorarium DSM 8532 Genome accession: NC_020134 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase LysS Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2611055 - 2612557 bp Length : 1503 bp Strand : - Note : - DNA sequence : ATGTCAGAAAATATTAATCATAGCCAAAATACCGAAGAAGTTCAGAATTTAAATGAAATACTGAAGGTGAGAAGACAGAA GCTCGGCGATCTGCAAAGCAAGGGAAAGGACCCGTTTAAAATAGTAAAATACGATGTAACTCAAAAAACAAAAGAAATAA CCGATAATTTTGACGAATTTGAAGGAAAAGAAGTTTCCATAGCCGGAAGACTGATGGCAAAACGGGGAATGGGGAAGACC AGTTTCTGCGATATTCAGGACAGGGACGGAAAAATTCAGCTTTTCGTACGCATAAACGAGCTCGGGGAAGAAGCGTATGA AGAGTTCAAGAAACTGGACATAGGCGATATCATAGGTGTCAGAGGAACGGTTTTTAAAACCAAGATGGGTGAAATAAGCA TACGGGTTCATGAATATACGCTGTTGGCAAAGTCTTTAAGACCGTTGCCAGAAAAGTTTCATGGTCTGAAAGATACCGAT ACCCGTTATCGTCAGAGATATCTTGATCTTATTGTGAATCCCGAAGTAAAGAAAACATTTATTATGCGCAGCAGGATTAT CTCTGCAATAAGGAGCTTTTTGGACAGCAGGGGATTTCTTGAAGTTGAAACCCCAATTCTGAACCTGATTCCCGGAGGGG CTAATGCAAGGCCGTTTATAACTCATCATAACACACTGGATCTGGATATGTATTTAAGAATCGCGCCCGAATTATATTTA AAAAGGCTTATAGTCGGCGGAATGGAAAAGGTATACGAGTTAGGGCGGATGTTCAGGAATGAAGGCATGTCAGTAAAGCA TAACCCGGAATTCACGTTACTGGAAGTGTATGAAGCATATACTGACTATCACGGAATGATGAAATTAACCGAAGATTTGT ATCTGCATGTCGCCGACACGGTACTGGGAACGAGAAAGTTTGAGTATCAGGGGTATGAGATTGATTTATCATTGCCATGG GCGCGCATGACAATGACAGAAGCTGTAAAGAAATACACCGGAATTGACTTTGACACGATTGCGTCAGATGACGAAGCTGT TGCGCTGGCAAAGGAAAAAGGGCTTGATGTGACGGGTAAGACAAAAAAAGGGGAAATACTTAACCTGTTTTTTGAAGAAT TTGTGGAAGAGCATCTTATCCAACCCACATTTATAATGGATTATCCTGTTGAAGTATCGCCGCTGACGAAGAGAAAACCC GACAAGCCTGAACTTACCGAAAGGTTTGAACTGTTTATTGTGGGACGGGAAATGGCAAATGCCTATTCTGAATTAAATGA TCCCATTGATCAGAAGGAAAGATTTCTGGCTCAGTTGAGAAAACGGGAACAGGGCGATGAGGAAGCAAATATGATGGATG AAGACTTTATAATTGCGCTGGAGCACGGCATGCCGCCCACAGGTGGTCTTGGCGTGGGCATTGACAGGCTTGTAATGTTG TTCACAAATTCATATTCCATACGCGATGTGCTGCTGTTCCCGACTATGAAGCCAAGAGAATAA Protein sequence : MSENINHSQNTEEVQNLNEILKVRRQKLGDLQSKGKDPFKIVKYDVTQKTKEITDNFDEFEGKEVSIAGRLMAKRGMGKT SFCDIQDRDGKIQLFVRINELGEEAYEEFKKLDIGDIIGVRGTVFKTKMGEISIRVHEYTLLAKSLRPLPEKFHGLKDTD TRYRQRYLDLIVNPEVKKTFIMRSRIISAIRSFLDSRGFLEVETPILNLIPGGANARPFITHHNTLDLDMYLRIAPELYL KRLIVGGMEKVYELGRMFRNEGMSVKHNPEFTLLEVYEAYTDYHGMMKLTEDLYLHVADTVLGTRKFEYQGYEIDLSLPW ARMTMTEAVKKYTGIDFDTIASDDEAVALAKEKGLDVTGKTKKGEILNLFFEEFVEEHLIQPTFIMDYPVEVSPLTKRKP DKPELTERFELFIVGREMANAYSELNDPIDQKERFLAQLRKREQGDEEANMMDEDFIIALEHGMPPTGGLGVGIDRLVML FTNSYSIRDVLLFPTMKPRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-115 | 49 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 7e-88 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007373985.1 | lysine--tRNA ligase LysS | VFG1668 | Protein | 1e-115 | 49 |
