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Name : clpC (Cst_c24080) Accession : YP_007373978.1 Strain : Clostridium stercorarium DSM 8532 Genome accession: NC_020134 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 2605663 - 2607960 bp Length : 2298 bp Strand : - Note : - DNA sequence : ATGATTAAGTGTTCAATATGCAAGAAAAATATTGCAGTGATTTTTATAACCAAGGTAGTTAACGGAAAACAGGAACCGAT AGGTTTATGCATGCAGTGCGCACAAAAACAGGGGATTGCCCCGCTAAATCATATACTCCAGCAGACTGGGTTGACGCCAC AGGATTTTGAGAATTTAAGCAATCAGATGATGAGTTTGTTTGAGAATATGGATATGGAAGGCTTTGAAGACGCTTTTTCC GATAATGAAGAGGGAAGAAGCAACCAGTTGCTGCGGCCATTTGGCAATATGGTATCCGATGACAGAGCTTCCGATGATGA CAAAAAAAACGGAGGTTACGACAATGTCAGGATTAAGACCAAAAAAGGAAGACGTAAATATCTTGACATGTATGGGATAA ATTTGACCGAGAAGGCCGCAAAAGGTGAAATTGACAGGATTATCGGCCGCGAGTGCGAGATAGATCGCGTTATCCAGATT CTCAACAGGCGTACCAAGAACAATCCCGTGCTTATCGGTGAGCCCGGTGTAGGTAAAACCGCGATTGCCGAGGGGCTGGC GGTGCGGATTGTTAACAAGCAGGTACCGGCAAGGTTCTTTTCCACTGAGATTTATTTGCTGGATCTGGCCGCAGTTGTGG CAGGAACACAGTTCAGGGGCCAGTTTGAGGCAAGGATGAAATCCATATTGAAGGAGGCAAAGGAAAACGGAAACATTATC CTTGTAATAGACGAATTGCACAATATAATAGGTGCGGGAGATGCCGAAGGCGGAGCAATGAATGCGGCCAATATTCTGAA ACCCGCCCTTGCCCGTGGGGAAGTGCAGGTAATAGGTGCAACCACACTGGATGAATACAGAAAATACATTGAAAAGGATG CGGCACTGGAAAGACGGTTCCAGCCCGTTATGGTAGATGAGCCTACCGTTGCGGAGACAATAGAAATTCTTAAGGGTATT AAGGGATACTATGAGGAATACCACCATGTCAGAATACCCGATGATGTTATTGAATACGCGGTAATGCTGTCGGACAGATA TATCCATGACAGATTTCTGCCCGACAAGGCGATTGACGTGATTGACGAGGCAGGCTCAAGGGTAAATCTGATGAATCAGG GACTTGTGGAACTGGAGGCTTTAAAGCAGGAGCTGCAGAGAGTCCAGGAAGCCAAGGAACAGGCGGCGCTGCATGATGAT TACAAGAAAGCGGCCGACTATAAAGTGGAGGAATGCAGGCTGCAGGAAAAAATCAATGAACTTACCGCGAAATACGGGAC GATGGATGTCACAAAGGACGATGTTGCTTATGTTATTGAGTCATGGACAAAGATACCGGTAAGCAGAATAACGGAAGCCG AAGCCCAGAAACTGATCTCGCTGGAGGAACGCCTTCACAGAAGGGTTGTAGGACAGAACAGGGCTGTTGAAAGTGTGGCT AAAGCCATAAGAAGGAACAGATCTGATTTCAGAAGGAAGCGTAAGCCCAGTTCGTTCATTTTCGTCGGGCCCACCGGTGT CGGAAAAACTGAGCTTGCCCGTGCTGTCGCCGAGGAACTGTTTGGCAGCGAGGATGCAATGATACGTCTTGATATGTCGG AATATATGGAAAAACATACAGTTTCGAAATTGATAGGCGCACCTCCGGGATACGTAGGATTTGATCAGGGAGGGCAGTTA ACCGAGAAAGTACGCAGAAAGCCTTATTCGGTTATCCTGCTGGACGAGATTGAAAAAGCCCATCCCGATGTGTTCAATAT CCTGCTGCAGATTATGGAAGACGGAAGGCTTACCGACAGTCAGGGAAGAACGGTCAGCTTTGAAAACACAATCATTATCA TGACGTCTAATGCCGGAACCAGTAACAGGGCCTACAGCATAGGTTATAATAATGAGAACGTCGTTAACATGGAAAAGCAG ATTATGGATGCGGTAAAAAGCACTTTCAGGCCCGAATTCCTGAACAGGGTGGATGAAATTATTGTATTTGAGGAATTGAC GAAAGAGCAGCTCAATGCCATTGTCAACATGATGATAGAAGAAGTGCGGAGAAACGCTGCGGAAAAAGGTATAGACATTG TGGTCAGTCAGAAGGCAAAGGACGCCCTGGTGGAAAAGGGCTACAGCCCGAAATACGGAGCAAGGCCGCTCAGGAAGAAG ATTCAGCAGTATATAGAAGACGAGCTTGCCGAAAAGTATTTAAAGGGCGAAATTTCAAACGGTTCTGTTGTTTCGGTTGA CTATGACGGGAACAAATTCACCTTTGAAATACGGAATTTAACACCTGCAAACAATTGA Protein sequence : MIKCSICKKNIAVIFITKVVNGKQEPIGLCMQCAQKQGIAPLNHILQQTGLTPQDFENLSNQMMSLFENMDMEGFEDAFS DNEEGRSNQLLRPFGNMVSDDRASDDDKKNGGYDNVRIKTKKGRRKYLDMYGINLTEKAAKGEIDRIIGRECEIDRVIQI LNRRTKNNPVLIGEPGVGKTAIAEGLAVRIVNKQVPARFFSTEIYLLDLAAVVAGTQFRGQFEARMKSILKEAKENGNII LVIDELHNIIGAGDAEGGAMNAANILKPALARGEVQVIGATTLDEYRKYIEKDAALERRFQPVMVDEPTVAETIEILKGI KGYYEEYHHVRIPDDVIEYAVMLSDRYIHDRFLPDKAIDVIDEAGSRVNLMNQGLVELEALKQELQRVQEAKEQAALHDD YKKAADYKVEECRLQEKINELTAKYGTMDVTKDDVAYVIESWTKIPVSRITEAEAQKLISLEERLHRRVVGQNRAVESVA KAIRRNRSDFRRKRKPSSFIFVGPTGVGKTELARAVAEELFGSEDAMIRLDMSEYMEKHTVSKLIGAPPGYVGFDQGGQL TEKVRRKPYSVILLDEIEKAHPDVFNILLQIMEDGRLTDSQGRTVSFENTIIIMTSNAGTSNRAYSIGYNNENVVNMEKQ IMDAVKSTFRPEFLNRVDEIIVFEELTKEQLNAIVNMMIEEVRRNAAEKGIDIVVSQKAKDALVEKGYSPKYGARPLRKK IQQYIEDELAEKYLKGEISNGSVVSVDYDGNKFTFEIRNLTPANN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-157 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007373978.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 5e-163 | 53 |
| clpC | YP_007373978.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 3e-160 | 48 |
