Gene Information

Name : phoB (Cst_c22230)
Accession : YP_007373793.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020134
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2413232 - 2413900 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGATTTACTGCGTGGAAGATGATCCGAATATAAGGGAACTGGTCATTTATGCGCTTAAAACAAGCGGATTTGAAGCCAA
AGGTTTCCCCGACGCAAAAAACTTTTTTGAGGAACTTAAAAAGAAGCTTCCGTCCTTGATCCTGCTGGATATAATGCTCC
CGGGCACCGACGGACTAACGGTTTTAAAAATGCTTAAAGACAACGCCGTTACAAAGGACATTCCTGTTATCATGCTCACT
GCAAAAGGGACAGAGTTTGACATAGTGCAAGGTCTTGACCTTGGCGCCGACGACTATATCACGAAACCGTTCGGCGTGCT
GGAACTTATCTCGCGGATAAAGTCGGTATTGAGAAGAGTGGAACCAAAGACCGACCAAAGCATATTAAAAGTCGGGGATA
TAACCATCGATACCGGAAGACACATGGTAACGGCAGGCAATAATGAAATAAAGCTTACATCGAAGGAATTTCAGCTGCTT
TACCTTTTAATGTCCAACGCCGGTATTGTGCTGACGCGGGACATGCTTCTGGACAAAATATGGGGATTTGATTTTGACTG
CGAAACCCGGACTTTGGACGTACATATCCGTTCCCTGAGAAAAAAACTCGGCGAGCATGGCAGAAAAATTGAAACGGTCC
GCGGGATCGGATACAGGATGGGAGTATGA

Protein sequence : 
MIYCVEDDPNIRELVIYALKTSGFEAKGFPDAKNFFEELKKKLPSLILLDIMLPGTDGLTVLKMLKDNAVTKDIPVIMLT
AKGTEFDIVQGLDLGADDYITKPFGVLELISRIKSVLRRVEPKTDQSILKVGDITIDTGRHMVTAGNNEIKLTSKEFQLL
YLLMSNAGIVLTRDMLLDKIWGFDFDCETRTLDVHIRSLRKKLGEHGRKIETVRGIGYRMGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-29 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-28 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_012469.1.7686381. Protein 2e-35 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_002952.2859905.p0 Protein 3e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_009641.5332272.p0 Protein 4e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_013450.8614421.p0 Protein 4e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_007793.3914279.p0 Protein 4e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_003923.1003749.p0 Protein 4e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_007622.3794472.p0 Protein 3e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_002745.1124361.p0 Protein 4e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_009782.5559369.p0 Protein 4e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_002951.3237708.p0 Protein 4e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB NC_002758.1121668.p0 Protein 4e-37 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB CP001918.1.gene5135. Protein 2e-26 41
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB BAC0347 Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB VFG0596 Protein 4e-30 44
phoB YP_007373793.1 phosphate regulon transcriptional regulatory protein PhoB VFG0473 Protein 3e-29 41