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Name : clpC1 (MULP_05361) Accession : YP_007371300.1 Strain : Mycobacterium liflandii 128FXT Genome accession: NC_020133 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit ClpC1 Function : - COG functional category : - COG ID : - EC number : 3.4.-.- Position : 5776661 - 5779207 bp Length : 2547 bp Strand : - Note : - DNA sequence : ATGTTCGAACGTTTTACCGACCGTGCCCGCCGGGTCGTTGTCCTGGCGCAAGAAGAGGCCCGGATGCTGAACCACAACTA CATCGGCACCGAGCACATTCTGCTGGGGCTAATCCATGAAGGCGAAGGCGTTGCGGCCAAGTCGCTGGAGTCGCTCGGGA TCTCGCTGGAAGGTGTGCGCAGCCAGGTCGAAGAGATCATCGGCCAGGGCCAGCAGGCACCGTCCGGGCACATCCCGTTC ACTCCGCGCGCCAAGAAGGTGCTCGAACTCAGCCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGTACCGAGCA CATCCTGCTCGGCCTGATTCGCGAGGGCGAGGGTGTGGCCGCCCAGGTGCTGGTCAAGCTGGGCGCCGAACTGACCCGGG TGCGCCAGCAGGTGATCCAGCTGCTGAGCGGCTACCAGGGCAAGGAGGCCGCCGAGGCAGGCACCGGCGGCCGGGGAGGG GAGTCCGGCTCTCCCTCCACGTCGCTGGTTCTCGACCAGTTCGGCCGCAACCTGACCGCGGCTGCCATGGAAGGCAAGCT GGACCCGGTCATCGGCCGCGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTCTCCCGGCGCACCAAGAACAACCCGGTGC TCATCGGCGAGCCCGGCGTGGGCAAGACCGCTGTGGTCGAGGGCCTGGCGCAGGCCATCGTGCACGGCGAGGTGCCCGAG ACGCTGAAGGACAAGCAGCTCTACACGCTGGACCTCGGCTCGCTGGTCGCGGGTTCGCGCTACCGTGGTGACTTCGAGGA ACGCCTGAAGAAGGTGCTCAAGGAGATCAATACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCG GGGCGGGTGCCGCCGAGGGCGCGATCGATGCCGCAAGCATCCTCAAGCCCAAGCTGGCTCGCGGCGAGCTGCAGACGATC GGTGCCACCACCCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCGCTGGAGCGCCGTTTCCAGCCGGTGCAGGT GGGGGAGCCGACGGTCGAGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGCGTGTCGA TCACCGATTCCGCGATGGTGGCCGCCGCGACGCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCGGACAAGGCGATC GACCTGATCGACGAGGCGGGCGCCCGGATACGGATCCGTCGCATGACCGCGCCGCCAGACCTGCGCGAGTTCGACGAGAA GATCGCCGACGCGCGCCGGGAGAAGGAATCGGCGATCGACGCCCAGGACTTCGAGAAGGCGGCGAGCCTGCGCGACCGGG AGAAGCAACTGGTGGCGCAGCGTGCCGAGCGTGAAAAGCAATGGCGTTCGGGCGATCTCGACGTGGTCGCCGAAGTCGAT GACGAACAGATCGCCGAAGTGCTGGGCAACTGGACTGGCATCCCGGTGTTCAAGCTCACCGAGGCGGAAACCACCCGCCT GCTGCGGATGGAAGATGAGCTGCACAAGCGGATCATCGGCCAGGAAGACGCGGTCAAGGCGGTCTCCAAGGCGATCCGCC GCACCCGCGCCGGGCTGAAGGACCCGAAGCGCCCGTCGGGATCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACC GAGCTGTCCAAGGCGCTGGCCAACTTCTTGTTCGGTGACGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGA CCGGTTCACCGCGTCCCGGCTCTTCGGTGCTCCGCCCGGATATGTCGGCTACGAAGAGGGCGGCCAGCTCACCGAGAAGG TGCGGCGCAAGCCGTTCAGCGTGGTGCTCTTCGATGAGATCGAGAAGGCACACCAGGAGATCTACAACAGTCTGTTGCAG GTCCTCGAGGACGGCCGGCTCACCGACGGCCAGGGCCGCACGGTCGACTTCAAGAACACCGTGCTGATCTTCACGTCGAA TCTGGGGACATCCGATATTTCCAAGCCCGTCGGCCTCGGGTTCAGCCAGACTGGCGGCGAGAACGACTACGAGCGGATGA AGCAGAAGGTCAACGACGAGCTCAAGAAGCACTTCCGGCCGGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCAC CAGCTGACTCGCGACGAGATCATCCGGATGGTCGACCTGATGATCGGCCGCGTCGCCAACCAGCTCAAGAGCAAGGACAT GGCGCTCGAGCTGACCGACAAGGCAAAGTCGCTGCTGGCCAAGCGCGGTTTCGACCCGGTCTTGGGTTCTCGTCCGCTGC GGCGAACCATTCAGCGTGAGATCGAGGACCAGCTCTCGGAGAAGATCCTCTTTGAGGAGGTCGGTCCGGGACAGGTCGTC ACCGTCGACGTCGACAACTGGGACGGCGAGGGCGCCGGTGAGGACGCGAAATTTACGTTCACCGGTACCCGCAAGCCGCC GAGTGAGCCGGACCTGGCAAAGGCCGGAGCACACAGCGCCGGGGGACCTGGGCCCACCGAGCAGTAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGG ESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAI DLIDEAGARIRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSQTGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH QLTRDEIIRMVDLMIGRVANQLKSKDMALELTDKAKSLLAKRGFDPVLGSRPLRRTIQREIEDQLSEKILFEEVGPGQVV TVDVDNWDGEGAGEDAKFTFTGTRKPPSEPDLAKAGAHSAGGPGPTEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 81 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC1 | YP_007371300.1 | ATP-dependent protease ATP-binding subunit ClpC1 | VFG0079 | Protein | 0.0 | 60 |
| clpC1 | YP_007371300.1 | ATP-dependent protease ATP-binding subunit ClpC1 | VFG0080 | Protein | 2e-148 | 51 |
