|
Name : lysX (MULP_03168) Accession : YP_007369399.1 Strain : Mycobacterium liflandii 128FXT Genome accession: NC_020133 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase 2 LysX Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3436118 - 3439435 bp Length : 3318 bp Strand : + Note : - DNA sequence : GTGACCGTCACAAAGCCTCGCTCGGTGCAGGGTAGGCACATCTCTCGGTATGACTGGGTTCCGGCCGCCGCTGGCTGGGC CGTCGGGGTCATCGCGACCCTGTCACTGCTGGCCAGCATTTCGCCGCTGGTTCGGTGGATCATCAAGGTTCCCCGAGAAT TCATCAACAGTTATCTGTTCAATTTTCCCGACACCAGCTTCGCCTGGTCTTTTGTGCTGGCACTGCTGGCGGCGGCCCTG GCCGCGCGTAAACGGATCGCCTGGCTACTGCTGCTGACCAACGTCGTCTTGGCGGCTTTCCTCAACGCCGCCGACATCGC CGCGGGCGGCAACACCGCGGCCCAGAACTTCGGCGAAAACCTCGGGTTCGCAGTACACGTGGTGGCGATCGTCGTGCTGG TGCTGGGATATCGGCAGTTCTGGGCCAAGGTCCGCAGGGGTGCACTGTTCAAGGCGGCCGCGGTGCTGGTGGCCGGTGGT GCGATCGGAATCCTGGTGTCCTGGGGCCTGGTCGAGCTGTTTCCGGGATCCCTCGCGCCGCACGACCGTTTGCCCTACGT GGCCAACCGGGTGATCGGCTTCGCCCTGGCCGATCCCGACCTGTTCACCGGCCGGCCGCACGTCTTCCTCAACGCCATGT TCGGCTTGTTCGGCGCTCTCGCCCTAATTGCGGCCACCATCGTGCTGTTTCAGTCCCAGCGTGCCGACAACGCGTTGACC GGCGAGGACGAGTCGGCCATCCGGGGGTTGCTCGAGCTGTACGGCAACAGCGACTCGCTGGGCTACTTCGCGACCCGTCG CGACAAGTCGGTGATATTCGCCTCCAGCGGCCGTGCCGCCATCACCTATCGGGTCGAAATCGGTGTCTGCCTGGCCAGTG GCGATCCGGTAGGCGACCCGCGGTCGTGGCCGCAAGCGATCGACGCATGGCTACGGCTGTGCCAGACCTATGGTTGGTCG CCCGGTGTGATGGGGGCCAGTTCACAAGGGGCCAAGGCATATCGCGAGGCGGGTTTGAACGCGCTTGAACTCGGCGACGA GGCGATCTTGGTGCCCGCCGATTTCACGCTGTCCGGCCCCGACATGCGCGGCGTGCGCCAAGCCGTGACCAGGGCACGTC GCGCCGGTCTGACGGTGCGCATCCGGCGTCACCGGGATATCTCCGACGCCGAAATGGAACAGACGATCGATCGCGCCGAC GGCTGGCGCGACACCGAATCCGAGCGCGGCTTCTCGATGGCGCTCGGCCGCCTCGGCGACCCGGCCGACACCGACTGCTT GTTGGTCGAGGCGCTTGACCCCGACGACCTGGTAGTGGCGATGTTGTCGCTGGTGCCTTGGGGTACCAGCGGGGTCTCCC TGGACCTGATGAGACGTTCTCCGCAATCGCCCAACGGCACCATCGAGCTGATGGTCAGCGAACTGGCGCTGCGCGCCGAA GGCCTCGGCATTAGCCGCATCTCGCTGAACTTCGCGATGTTCCGGTCGGCTTTCGAGCAAGGCGCCCAATTGGGCGCCGG GCCGGTGGCCCGCTTGTGGCGTTGGCTGCTGGTCTTCTTTTCCCGGTGGTGGCAGATCGAGACGCTGTACCGATCCAACC AGAAGTATCAGCCGCAATGGGTGCCCCGCTACGCCTGCTATGAGGACGCGCGGGTGATCCCCAAGGTGGGTGTCGCCTCC GTGATCGCCGAGGGGTTCCTGGTATTGCCATTCAGCCGGCGCAACAAGGTGCACACCGGTCACCATCCCGCGGTCCCCGA ACGGCTGGCGGCCACCGGTTTGTTGCACCATGACGGATCGGCGCCCGACGTCAGCGGGCTGCGGCAATCGGCAATTGCCG ACGGCGACGACCCCCAACGTCGGCTGCCCGAGCAAGTCCGGGTGCGGCTGAACAAGTTGAAGAAATTGCGCAGCAGCGGC ATTGACGCCTATCCGGTGTGCGAACCGCCCACTCATACAGTCGCGCAAGCGATGGACGCCGACGACCAGGCGAGCGTGTC GGTATCCGGGCGGATCTTGCGGGTACGCAACTACGGTGGAGTGCTGTTCGCGCACTTGCGCGACTGGAGCGGCGAGATTC AGGTGCTGCTGGACAACTCGCGACTCGAGCAGGGCCGCGCCGCGGATTTCAACGCGGCCATAGACCTTGGTGACCTGGTC GAGATGACCGGGCAGATGGGTTCGAGCAAGACCGGAACGCGATCACTGATCGTGCGCCGCTGGCGTCTGATCGGTAAGTG CCTGCGCCCCTTGCCCAACAAGTGGAAGGGGTTGACCGATCCCGAAGCCCGAGTGCGGACCCGCTACGTAGACCTCGCTG TCAACGCCGAGTCGCGCGCCCTCATCACGGCCCGCAGCGCGGTGCTGCGCTCCGTCCGAGAAACCCTGTCCGCCAAGGGG TTCATCGAGGTCGAGACACCCATCCTGCAACAGGTACACGGCGGCGCAACGGCCCGCCCGTTCATCACCCACATCAACAC CTACTCCATGGACCTGTTCTTGCGCATCGCGCCGGAGCTGTATCTCAAGCGACTGTGCGTCGGCGGGGTGGAACGGGTCT TCGAACTCGGCCGGGCCTTTCGGAATGAGGGCGTCGACTTCAGCCACAACCCGGAGTTCACCCTGTTGGAGGCCTATCAA GCGCACGCCGACTACCGGGTATGGATCGACAGCTGCCGCGAGCTGATCCAAAACGCCGCCCAGGCCGCCAACGGTGCACC CGTCGCGATGCGCCCGGCCGGCGGCGGCCGCCTCGAACCGGTGGACATCTCGGGGGTCTGGGCGGTCAAGACCGTGCACG ACGCGGTGTCAGAGGCCCTCGGTGAGCAGATCGACGCCGATACCGACTTGGCCACCCTGCGCAGGCTGGCCGACGCCGCA CGCATCCCCTATCGGGCGCAGTGGGATGCCGGCGCGGTGGTGCTGGAGCTCTACGAACACCTGGTGGAGAGCCGCACCGA GCAGCCGACGTTCTACCTCGACTTCCCGACCTCGGTGTCCCCGCTGACCCGGCCGCATCGCAGCAAGCCCGGAATCGCCG AACGTTGGGACCTGGTGGCCTGGGGCGTCGAGCTTGGTACCGCCTACAGCGAGCTCACCGACCCCGTCGAACAGCGGCTC CGCTTGGAGGAGCAGTCTTTGCTCGCCGCCGGCGGGGATCCCGAAGCGATGCAGCTCGACGAAGACTTCCTGCAGGCCAT GGAATACGCGATGCCGCCCACCGGGGGCCTCGGCATGGGCGTCGACCGGGTCGTCATGCTGATCACCGGGCGCAGCATCC GTGAAACGCTCCCATTCCCGCTGGCCAAGCCGCACTAA Protein sequence : MTVTKPRSVQGRHISRYDWVPAAAGWAVGVIATLSLLASISPLVRWIIKVPREFINSYLFNFPDTSFAWSFVLALLAAAL AARKRIAWLLLLTNVVLAAFLNAADIAAGGNTAAQNFGENLGFAVHVVAIVVLVLGYRQFWAKVRRGALFKAAAVLVAGG AIGILVSWGLVELFPGSLAPHDRLPYVANRVIGFALADPDLFTGRPHVFLNAMFGLFGALALIAATIVLFQSQRADNALT GEDESAIRGLLELYGNSDSLGYFATRRDKSVIFASSGRAAITYRVEIGVCLASGDPVGDPRSWPQAIDAWLRLCQTYGWS PGVMGASSQGAKAYREAGLNALELGDEAILVPADFTLSGPDMRGVRQAVTRARRAGLTVRIRRHRDISDAEMEQTIDRAD GWRDTESERGFSMALGRLGDPADTDCLLVEALDPDDLVVAMLSLVPWGTSGVSLDLMRRSPQSPNGTIELMVSELALRAE GLGISRISLNFAMFRSAFEQGAQLGAGPVARLWRWLLVFFSRWWQIETLYRSNQKYQPQWVPRYACYEDARVIPKVGVAS VIAEGFLVLPFSRRNKVHTGHHPAVPERLAATGLLHHDGSAPDVSGLRQSAIADGDDPQRRLPEQVRVRLNKLKKLRSSG IDAYPVCEPPTHTVAQAMDADDQASVSVSGRILRVRNYGGVLFAHLRDWSGEIQVLLDNSRLEQGRAADFNAAIDLGDLV EMTGQMGSSKTGTRSLIVRRWRLIGKCLRPLPNKWKGLTDPEARVRTRYVDLAVNAESRALITARSAVLRSVRETLSAKG FIEVETPILQQVHGGATARPFITHINTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQ AHADYRVWIDSCRELIQNAAQAANGAPVAMRPAGGGRLEPVDISGVWAVKTVHDAVSEALGEQIDADTDLATLRRLADAA RIPYRAQWDAGAVVLELYEHLVESRTEQPTFYLDFPTSVSPLTRPHRSKPGIAERWDLVAWGVELGTAYSELTDPVEQRL RLEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGRSIRETLPFPLAKPH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-153 | 44 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-153 | 44 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 3e-153 | 44 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-153 | 44 |
