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Name : hsdM (MULP_02125) Accession : YP_007368520.1 Strain : Mycobacterium liflandii 128FXT Genome accession: NC_020133 Putative virulence/resistance : Unknown Product : type I restriction/modification system DNA methylase HsdM Function : - COG functional category : - COG ID : - EC number : 2.1.1.- Position : 2301098 - 2302552 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGGCACCGTCGACGATGAAAGAGCTCAAAGACACGCTCTGGAAAGGCGCCGAGAAGCTGCGCGGGTCCATTCCGGCCAG CCAGTACAAAGACGTCATTCTCGGCCTGGTCTTTCTCAAGTTCGTTTCCGATGCCCGAGACGGGCGCAAGCCATTCGTGG TGCCCCCCGAAGCGCGCTGGGAAGCGTTGGCCGGCAATGCGAAATCACCGGACATCGGCCAGCTCATCGACACGGCGATG CTGTCGGTAATGACGGCCAATCCGTCGCTGGCCGCGACCCTGCCGCAGCTGTATCACAAGGTCGATCAGCGGCGGCTCGG CGAACTGGTCGAGGTGCTCGGCGCGGCGCGATTCAGTGGCCGGCCAAGTCATCGCGCGCGTGACCTGATGGGTGAGGTGT ACGAATACTTCCTCGGCAACTTCGCGCGCGCGGAGGGACGACGCGGCGGCGAATTCTTCACCCCACCCAGCGTCGTTCGA GTGATCGTGGAGATTCTCGAACCCTCGAGCGGTCGGATCTATGACCCGTGCTGCGGATCGGGCGGGATGTTCGTGCAAAC CGAGCGCTTCATCTGCGCCCACGACGGGGACCCCGCGCAGATATCGATCTACGGTCAGGAGAGCGTCGAGCAGACCTGGC GGATGGCAAAGTTGAACCTGGCCGTCCATGGGATCGATGATGCGGGCCTGGGCGCGCGTTGGGGCGACACCTTCGCCACC GACCAACACGACGGCGTGCCGATGGACTACGTGATGGCCAATCCGCCCTTCAACATCAAGGATTGGGCCCGCGACGAACA GGACCCGCGTTGGCGGTTCGGCACTCCGCCCGCCGCAAATGCGAACTTCGCCTGGATTCAGCACATCCTGTCCAAGCTCG CGCCGACAGGTCAGGCCGGGGTGGTGATGGCCAATGGCTCGATGTCATCGAAAACCAATGGAGAGGACAGGATTCGCGCT GGAATCATTGATGCAGACCTGGTCTCATGCATGGTCGCCCTGCCGACGCAGCTGTTTCGCAGTACCGGAATTCCGGTGTG TCTGTGGTTCTTCGCCAAGGACAAGAAAGCTCGTTCGGGCCAGGTGCTGTTCATCGACGCGCGCGGGCTCGGGAGCATGT TGGACCGCTGCGAGCGAACCCTGACCGATGACGACGTAGCCCGCATCGGCGATACCTATCACGGCTGGTTCGGATCCGCA TCAGCCGTCGCGAAAGGTGCTGTTTACCAGGATATTCCGGGATTTTGCAGGTCGGCATCGTTGGATGAGATCCGCGCCGA GGGGTACGTGCTCACGCCGGGGCGCTATGTGGGGACTGGAGCGTCCTGTGCTGACGGCGAACCGATCGGCGACAAACTCA CAAGGTTGACCACCCAGTTGCTGGCCGCGCTGGATGAATCGACAAAACTTGACGAGGCGGTGCGTGCGCAGTTGGGGCGG GTGCGGTGGAGGTGA Protein sequence : MAPSTMKELKDTLWKGAEKLRGSIPASQYKDVILGLVFLKFVSDARDGRKPFVVPPEARWEALAGNAKSPDIGQLIDTAM LSVMTANPSLAATLPQLYHKVDQRRLGELVEVLGAARFSGRPSHRARDLMGEVYEYFLGNFARAEGRRGGEFFTPPSVVR VIVEILEPSSGRIYDPCCGSGGMFVQTERFICAHDGDPAQISIYGQESVEQTWRMAKLNLAVHGIDDAGLGARWGDTFAT DQHDGVPMDYVMANPPFNIKDWARDEQDPRWRFGTPPAANANFAWIQHILSKLAPTGQAGVVMANGSMSSKTNGEDRIRA GIIDADLVSCMVALPTQLFRSTGIPVCLWFFAKDKKARSGQVLFIDARGLGSMLDRCERTLTDDDVARIGDTYHGWFGSA SAVAKGAVYQDIPGFCRSASLDEIRAEGYVLTPGRYVGTGASCADGEPIGDKLTRLTTQLLAALDESTKLDEAVRAQLGR VRWR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 6e-116 | 47 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 7e-116 | 46 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 4e-116 | 46 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 9e-91 | 45 |
