Gene Information

Name : fliP (LAW_00661)
Accession : YP_007365743.1
Strain : Lawsonia intracellularis N343
Genome accession: NC_020127
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 789827 - 790615 bp
Length : 789 bp
Strand : -
Note : -

DNA sequence : 
ATGATTCTGAAAGTTCCTGAAAAATATTCCATTTGTATAATATGTGTTATTATCTTTCTTTCTGTTAACTTGTTTTTTCC
ATTAAGTATACAAGCTGCAGAAGACATAGCTATACCTAATTTACAACTTACACTGTCTGGTGGACAGACAGAACCTGAGA
AAGTTTCTTTATTATTAGAAATCTTGTTTATGTTAACGGTGCTTTCATTAGCACCAGCCATTATGCTTACTGTTACAAGT
TTTACAAGAATTATTATAGTATTTCATTTTCTTAGACAAGCTATGGGTATTCAGCAGATTCCGCCTACCCAAATTCTTGC
AAGTTTAGCTATTTTTATGACTGTTATCATAATGTTTCCTGTTGGGAAACAAATTAATGATACAGCACTACAGCCGTATT
TGGATGAACGTTTAGGTTTTTCAGAAGCATTAACACGTGCACAAGCTCCATTACGGACGTTTTTATTTAAACATACACGT
GAGAAAGATCTATCTATTTTTTACTCTATTGCTAGGATGGAACAACCCAAAAATAAAGATGATGTCCCAACAATTTTACT
TTCTGCTGCTTATGTTATTAGTGAATTAAAAACAGGGTTTATCATTGGGTTTCTTATTTATATACCATTTCTTATAGTAG
ATATGGTTGTCTCAAGTGTATTACTTGCTATGGGTATGATGATGTTACCTCCTATGATGGTTTCTATGCCTTTTAAGCTA
CTGCTTTTTGTAATGATTGATGGTTGGAACTTACTTATTGGCTCATTAGTAAATAGCTTTTTATTATAA

Protein sequence : 
MILKVPEKYSICIICVIIFLSVNLFFPLSIQAAEDIAIPNLQLTLSGGQTEPEKVSLLLEILFMLTVLSLAPAIMLTVTS
FTRIIIVFHFLRQAMGIQQIPPTQILASLAIFMTVIIMFPVGKQINDTALQPYLDERLGFSEALTRAQAPLRTFLFKHTR
EKDLSIFYSIARMEQPKNKDDVPTILLSAAYVISELKTGFIIGFLIYIPFLIVDMVVSSVLLAMGMMMLPPMMVSMPFKL
LLFVMIDGWNLLIGSLVNSFLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 4e-21 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 1e-27 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_007365743.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-45 52
fliP YP_007365743.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-43 50
fliP YP_007365743.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-44 49
fliP YP_007365743.1 flagellar biosynthesis protein FliP VFG2338 Protein 6e-37 48
fliP YP_007365743.1 flagellar biosynthesis protein FliP VFG0394 Protein 7e-21 42
fliP YP_007365743.1 flagellar biosynthesis protein FliP VFG0188 Protein 2e-22 41