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Name : clpB (LAW_00125) Accession : YP_007365210.1 Strain : Lawsonia intracellularis N343 Genome accession: NC_020127 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 155538 - 158171 bp Length : 2634 bp Strand : + Note : - DNA sequence : ATGGATGTGAATAAGCTCACACAAAAGTCTCAAGAAGCATTATCAGAAGCACAAAGACTTTCTGCTCAATATGGGCATCA GGAAGTAGATGTAGAACATTTAGCATTGGCACTTACCATACAAGAGAATGGTTTTGTTCCAAGGGTTCTTGAACAAGCAA AAGTACATGTAAAAGTTGTGATTTCAGCATTAGAAGAAGTATTAAAAAAGCGTCCTTCTGTTCGTGGGCCTGGAAGTGAG ATGGGGAAAATTACTATCTCTCAAAGGCTAAGTAAAGTTATTGCCAATGCTGAATTATTAGCAAAACGATTGGGTGATGA GTATGTAAGTGTTGAGCATCTTTTTGCTGAATGTCTTAATGAGCCAGAGTCAACAGGAATGGGACAAGTTGCAAAAGAGA TACACCTTACGTCACAAAGATTTATAGAAGTTATGTTAGCTGTGCGTGGGCCACACCGTGTTACATCTCCTACTCCAGAA GATAGTTACGAAGCATTAAAAAAATATGGAAGAGATCTTGTAGAAGCTGCTCGAAAAGGAAAGCTTGATCCTGTAATTGG ACGGGATGCTGAAATCCGTAGAGTTATCCGAATTCTTTCTCGTAGAACAAAAAATAATCCTGTGCTTATTGGTGAAGCTG GAGTTGGGAAAACAGCTATAGTAGAAGGATTAGCTTTTCGTATCGTTCAAGGAGATGTTCCTGAAGGTTTAAAAGATAAA TCTATTTTTGCTCTTGATATGGGGTCACTGATTGCTGGAGCAAAGTACAGAGGAGAATTTGAAGAACGTCTTAAGGCTGT TTTAACAGAAGTCGAGAAGTCAGAAGGAAGAATTGTTCTTTTTATTGATGAATTACATACTATTGTTGGAGCAGGAAAAG CTGATGGAGCTATGGATGCAGGGAACTTTTTAAAACCTATGCTTGCTCGTGGAGAGCTCCATTGTATTGGTGCTACAACA TTGGATGAGTATAGAAAGTATATAGAAAAAGATCCTGCATTAGAGAGACGTTTTCAACCAGTGATGGTAGATGAACCTTC TGTTCAAGACACTATATCTATTTTACGAGGATTAAAAGAACGCTTTGAAGTTCATCATGGTGTGAGGATTAGTGATTCTG CTATAGTTGAAGCTGTAGTCCTTTCAGATAGATATATCTCAGATCGTCAACTACCAGACAAAGCAATTGATTTGATTGAT GAAGCTGCAGCTATGATCCGTACAGAAATCGACTCTCTTCCATCTGAGCTTGATGAAGTTAATCGTAAAATTATGCAGTT AGAAATAGAAAGAGAAGCCCTTAGAAAAGAAAGTGATTCAGCATCTCATGAAAGATTAGTACGTTTGGAAGAAGAATTAA AAGTACTGCAATCAACACAGTCTGAATTAAAAAAGCAATGGGAAACTGAAAAAGGTTCAATTGATTCTCTTCGAAACATA AAAGAACAAATTGAGCAGACACGACTTGCAATTGATGAGGCTACACGAAATGGTGAGCTAAGCAAGGCAGCAGAATTAAA ATACTCAAAACTGTTTGAATTAGAAAAACAATTAGAAGAACGTGAATCAAAGGCTGATGGTCCACGTTTACTTAAAGAAG AAGTTCGTCCAGATGATGTTGCTAATATTGTTGCTCGATGGACAGGTATACCTGTAACACGACTGTTAGAATCTGAAAAA GAAAAATTGTTACGATTGCCAGATACATTACATGAGCGTGTAATTGGTCAAGATGAGGCTGTGAATGTCATATGTAATGC TGTATTGCGTACACGTGCAGGACTTTCTGATCCAAAGAGACCACAAGGTTCTTTTATTTTTCTTGGACCTACAGGTGTTG GTAAAACAGAACTTTGTAAAGCTCTTGCAGAATCTTTATTTGATACTGAAGAAAATATGGTTCGCTTTGATATGAGTGAA TACATGGAGAAACACTCAGTAGCCAGGCTTATTGGAGCTCATCCTGGTTATGTAGGTTATGAAGAAGGTGGGCAACTTAC CAATGCTGTAAAACGTAAACCTTATAGTGTCATATTATTTGACGAAGTAGAAAAAGCACATCCTGATGTATTTAATATTT TTCTACAGTTACTTGATGATGGACGTTTGACGGATAATGCTGGCCGTACTATTAATTTTAGAAATACTATTATCATTATG ACTTCAAATATAGGCGCATATAAATTACTTGAAGGTATTAGTCCTGATGGTTCTTTTCATGAAGGTGTATATGAGTCTGT TATGGGTGATTTGAAACAACATTTTAGACCAGAATTTCTTAACCGAGTTGATGATGTTGTACTTTTTAAACCACTTCTGG CTGATCAAATAAGTAGTATTATAGACTTACAGTTAAGGAGTTTAAAAAAACGCCTAGAGTCACAGAAAGTTACATTAGAA TTAACACATTCAGCACATTTATATCTAGCTGAGAATGGATATGATCCTCATTATGGAGCACGTCCATTAAAAAGATACCT TCAACGAGTAGTGGAAACACCTTTAGCAAAGATGATTATTAGTGGTAAAGTTCATGAAAATCAACAGATTGTTATAGATT ACTCAGAAAGTGATTCTTCTTTACAATATGGTGTGAAAAGTGCATCTGAAGATATCAACTGGGTTCAAGTATAA Protein sequence : MDVNKLTQKSQEALSEAQRLSAQYGHQEVDVEHLALALTIQENGFVPRVLEQAKVHVKVVISALEEVLKKRPSVRGPGSE MGKITISQRLSKVIANAELLAKRLGDEYVSVEHLFAECLNEPESTGMGQVAKEIHLTSQRFIEVMLAVRGPHRVTSPTPE DSYEALKKYGRDLVEAARKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAFRIVQGDVPEGLKDK SIFALDMGSLIAGAKYRGEFEERLKAVLTEVEKSEGRIVLFIDELHTIVGAGKADGAMDAGNFLKPMLARGELHCIGATT LDEYRKYIEKDPALERRFQPVMVDEPSVQDTISILRGLKERFEVHHGVRISDSAIVEAVVLSDRYISDRQLPDKAIDLID EAAAMIRTEIDSLPSELDEVNRKIMQLEIEREALRKESDSASHERLVRLEEELKVLQSTQSELKKQWETEKGSIDSLRNI KEQIEQTRLAIDEATRNGELSKAAELKYSKLFELEKQLEERESKADGPRLLKEEVRPDDVANIVARWTGIPVTRLLESEK EKLLRLPDTLHERVIGQDEAVNVICNAVLRTRAGLSDPKRPQGSFIFLGPTGVGKTELCKALAESLFDTEENMVRFDMSE YMEKHSVARLIGAHPGYVGYEEGGQLTNAVKRKPYSVILFDEVEKAHPDVFNIFLQLLDDGRLTDNAGRTINFRNTIIIM TSNIGAYKLLEGISPDGSFHEGVYESVMGDLKQHFRPEFLNRVDDVVLFKPLLADQISSIIDLQLRSLKKRLESQKVTLE LTHSAHLYLAENGYDPHYGARPLKRYLQRVVETPLAKMIISGKVHENQQIVIDYSESDSSLQYGVKSASEDINWVQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-99 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-95 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-95 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007365210.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 6e-118 | 42 |
