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Name : kdsB (LAW_01025) Accession : YP_007366104.1 Strain : Lawsonia intracellularis N343 Genome accession: NC_020127 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 1218165 - 1218929 bp Length : 765 bp Strand : + Note : - DNA sequence : ATGAGTCAAATATCCCCTTTATACTATGGAATAATTCCTGCTAGATACGGTTCTTCACGTCTTCCTGGGAAACCATTAAT AGATATTTGGGGAAAACCTATGTTTTGGTATGTATATCAGAATGCAGTAGAATCTAATATTTTTAGATCTGTTGTATTAG CAACAGATAGCGAAGAAATTGCTGAATCAGCCCATCAGTTATCAATTCCTTATGTTATGACAAGTGTTGAACACATTAGT GGTACAGATCGTGTGTATGAAGCAGCTATAAAGATGAATATAGAACCTGACTCTGTAGTAGTAAATATCCAGGGAGATGA ACCATTAGTAAAGCCAGAAGCTATTCAACAACTAGTGGAGCCATTTATTGATGTTTCTATTCAGGTTACTACCCTTTCTA CAAGAATTACAGCAAATCAAGCAATGTTACCTCATCAAGTTAAAGTTGTTGTGTCTTCTAATGGTGATGCTTTGTATTTT TCAAGGGCAGCCATTCCTTATTTAAGAGATAACGATACTGATGGATATTACTTAGGTCATATTGGGTTATACGCTTTTCG TATGCATACGTTGGATAAATTCGTTCATTTGCCACCGTCCCAATTAGAACAATTTGAAAAGTTAGAACAACTAAGGTTGC TAGAGAATAATATACCAATTCGTGTAGTAAACACTAACCATACTTCTCAGGGTGTTGATACAGTAGAAGATTTAGAAATT GTTCAAGGATTATTAGCTCAAAGAATGGAGGCAGTAAGTCGTTAA Protein sequence : MSQISPLYYGIIPARYGSSRLPGKPLIDIWGKPMFWYVYQNAVESNIFRSVVLATDSEEIAESAHQLSIPYVMTSVEHIS GTDRVYEAAIKMNIEPDSVVVNIQGDEPLVKPEAIQQLVEPFIDVSIQVTTLSTRITANQAMLPHQVKVVVSSNGDALYF SRAAIPYLRDNDTDGYYLGHIGLYAFRMHTLDKFVHLPPSQLEQFEKLEQLRLLENNIPIRVVNTNHTSQGVDTVEDLEI VQGLLAQRMEAVSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-42 | 43 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-42 | 43 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-42 | 43 |
