Gene Information

Name : MYSTI_06597 (MYSTI_06597)
Accession : YP_007363554.1
Strain : Myxococcus stipitatus DSM 14675
Genome accession: NC_020126
Putative virulence/resistance : Unknown
Product : IS5 family transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8520749 - 8521411 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence :
GTGAGATTTTCCTTCATCCACGCGAAGAAGGCCTGCTTCCCGGTCGCCGCCCTCTGTCGTCTGTTGGGTGTGTCGCGCAG
CGGCTACTACGACTGGGCGACGAGACCCGAGTCCGCGCACCAGCAGCGCGACCGTGCCTTGCGGGTGGAGGTGCTCGCCG
TTCACCAGGAGAGCCGAGAAACCTACGGGGCTCCGCGTGTTCATGCGGAGCTGAAGGCTCGCGGCCGGCGTGTCGCCCGA
AAGCGCGTGGCTCGACTGATGCGTCAGGCCGGCGTGCGCGCCCGACGGCCCCGCCGCTTCGTGCGGACCACCGACTCGGC
CCACGGCCATCCGGTGGCTCCAAACGCGTTGGCGAGGAACTTCCGGCCGGGTCAGCCCCATCGCACCTGGGCCGGCGACA
TCACCTACGTGTGGACGGATGAGGGCTGGTTGTACCTGTCGGTACTCCTGGACCTCTTGAGCCGCAAGGTGGTGGGCTGG
GCCATGGGGGAGCGAATCGACCGGAGCCTGGTCGTGTCGGCACTCGCCATGGCGCTGCAGGGGCGGCCAGCACCGGCGTT
GCACCACTCGGACCGCGGCAGTCAGTATGCGAGTGACGACTACCGGCGACTCCTCGAGGAGCGAGGCATTGCGTGCAGCA
TGTCGCGCAAGGGCAATTGTTGA

Protein sequence :
MRFSFIHAKKACFPVAALCRLLGVSRSGYYDWATRPESAHQQRDRALRVEVLAVHQESRETYGAPRVHAELKARGRRVAR
KRVARLMRQAGVRARRPRRFVRTTDSAHGHPVAPNALARNFRPGQPHRTWAGDITYVWTDEGWLYLSVLLDLLSRKVVGW
AMGERIDRSLVVSALAMALQGRPAPALHHSDRGSQYASDDYRRLLEERGIACSMSRKGNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 9e-32 48
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 9e-32 48
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 9e-32 48
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-32 48
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 9e-31 47
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-31 47
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 9e-31 47
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-32 47
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-31 47
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 8e-32 47
unnamed AAF09030.1 unknown Not tested SHI-O Protein 7e-32 47
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 7e-32 47
tra5_2 AAC28569.1 transposase Tra5 Not tested LEE Protein 2e-18 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 3e-26 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-26 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-26 45
unnamed CAC39293.1 hypothetical protein Not tested LPA Protein 6e-23 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_06597 YP_007363554.1 IS5 family transposase orfB VFG1706 Protein 3e-32 48
MYSTI_06597 YP_007363554.1 IS5 family transposase orfB VFG1631 Protein 1e-26 41