Gene Information

Name : MYSTI_06240 (MYSTI_06240)
Accession : YP_007363197.1
Strain : Myxococcus stipitatus DSM 14675
Genome accession: NC_020126
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8089900 - 8090616 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGGGGGGATGACCTGGCCCTTGGCGGTGGCGGCGTTGGAGGGGCCGCTGGGCCAGCAGTCCTACGCGGGAAGTCC
GCTGGCGATGATGGGGATGCTGGCGTTGATGTCCCTGCTGCCGTTCGCGGTGTTGATGTTGACGAGCTTCTCGAAGATCG
CCGTGGTGTTGTCATTGGCGCGCTCGGCGATGGGGACGCAGCAGGCGCCCCCCACGGTGGTGTTGACGGGGCTGGCGGTG
GTGCTGACGGGGCACATCATGGCGTCGGTGATGGAGCGGATGTACGACGCGGGGCAGCTTGCGTATCAGGAGATGGAGAC
GGGCTCCGGTACGAAGATTCTCGAGTCGGCGGCGAAGGTGGCCGAGCCCTTGAGGACCTTCCTGGTGAAGCACGGCAGCG
CCGAGGAGCGGGCTCGTTTCGTGGACCTGGCGCGTGAGCTTCGCCCGCCCGAGGAAGCGGACACGGTGAGCGAGACGGAC
CTGTTCGTGGTCATTCCCGCGTTTGTCATCACCGAGCTGAAGGAGGCTTTTCAGATTGGCTTTCTCGTCTTCCTTCCGTT
CCTGGTGCTCGACATGGTCATCGCCAATGTGCTGCTGGCGTTGGGCATGCAGACGTTGTCGCCGAGTCAGGTGAGTCTGC
CTTTCAAGATACTCCTCTTCGTGGCGGTGGATGGTTGGTCGCTGCTCGCGCGGGGCCTCATCCTGGGATACCGGTGA

Protein sequence : 
MSGGMTWPLAVAALEGPLGQQSYAGSPLAMMGMLALMSLLPFAVLMLTSFSKIAVVLSLARSAMGTQQAPPTVVLTGLAV
VLTGHIMASVMERMYDAGQLAYQEMETGSGTKILESAAKVAEPLRTFLVKHGSAEERARFVDLARELRPPEEADTVSETD
LFVVIPAFVITELKEAFQIGFLVFLPFLVLDMVIANVLLALGMQTLSPSQVSLPFKILLFVAVDGWSLLARGLILGYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-32 46
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-32 46
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-32 46
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-37 46
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 4e-37 46
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 4e-37 46
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 1e-37 46
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 1e-37 46
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 3e-37 46
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 3e-37 45
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 4e-31 45
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 4e-37 45
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 7e-27 42
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 6e-27 42
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-31 42
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 4e-25 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 3e-25 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 6e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_06240 YP_007363197.1 type III secretion system protein VFG0394 Protein 7e-33 46
MYSTI_06240 YP_007363197.1 type III secretion system protein VFG0044 Protein 4e-37 44
MYSTI_06240 YP_007363197.1 type III secretion system protein VFG2338 Protein 8e-33 43
MYSTI_06240 YP_007363197.1 type III secretion system protein VFG2494 Protein 5e-32 42