Gene Information

Name : MYSTI_05956 (MYSTI_05956)
Accession : YP_007362913.1
Strain : Myxococcus stipitatus DSM 14675
Genome accession: NC_020126
Putative virulence/resistance : Unknown
Product : IS5 family transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7680603 - 7681178 bp
Length : 576 bp
Strand : +
Note : -

DNA sequence :
GTGCACACCACGGACTCCAAGCACAGCCTCCCGGTAGCGCCCAACGTGCTGGCTCGCGACTTCAATCCACCAAGGCCCGA
CCGGACGTGGGCGACGGACATCACGTACGTGCCCACGCGGGAGGGCTGGCTCTACCTGGCAGTAGTGCTGGACCTCTTCA
GTCGGCGCGTCATCGGTTGGGCCATGGACCGCTGCATCGACCGGCACCTGGTGCTTTCGGCTCTCGACATGGCGCTCAAA
GGTCGCTGTCCCCCAGCGGGACTGCTGCACCACTCGGATAGGGGCAGCCAATACGCCAGTGAGGACTACCAGCGAGCGCT
GGCCGCCCGCGGCATCCGGTTCAGCATGAGCCGCAAGGGCAACTGCTGGGACAACGCCGTGGTGGAGAGCTTCTTCTCCA
CGCTGAAGACAGAGCTGGTGCACGACGCGGACTTCTCGACGCGCGAGGCGGCGAAGGGTGGCTTGTTCGAGTTCATCGAG
GTGTTCTACAACCGCAAGCGGCGGCACTCCTCACTTGGCTACGTCAGTCCCGCCGACTTCGAGAAGACCGCCTCGCAGGT
GCCACTGGCTGCTTAA

Protein sequence :
MHTTDSKHSLPVAPNVLARDFNPPRPDRTWATDITYVPTREGWLYLAVVLDLFSRRVIGWAMDRCIDRHLVLSALDMALK
GRCPPAGLLHHSDRGSQYASEDYQRALAARGIRFSMSRKGNCWDNAVVESFFSTLKTELVHDADFSTREAAKGGLFEFIE
VFYNRKRRHSSLGYVSPADFEKTASQVPLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 1e-33 51
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 1e-33 44
tnpB CAB61574.1 transposase B Not tested HPI Protein 1e-33 44
CDC7B_2039 YP_005163480.1 transposase-like protein Not tested Not named Protein 9e-23 42
CDCE8392_1961 YP_005134492.1 transposase-like protein Not tested Not named Protein 9e-23 42
unnamed AAC31485.1 L0006 Not tested LEE Protein 3e-31 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 5e-31 42
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-31 42
Z5089 NP_290241.1 transposase Not tested LEE Protein 4e-31 42
unnamed CAI43898.1 putative transposase Not tested LEE Protein 4e-31 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 4e-31 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 4e-31 42
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 9e-29 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 9e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_05956 YP_007362913.1 IS5 family transposase orfB VFG0785 Protein 1e-31 42
MYSTI_05956 YP_007362913.1 IS5 family transposase orfB VFG1484 Protein 4e-29 41