Gene Information

Name : MYSTI_05188 (MYSTI_05188)
Accession : YP_007362154.1
Strain : Myxococcus stipitatus DSM 14675
Genome accession: NC_020126
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6665375 - 6666931 bp
Length : 1557 bp
Strand : -
Note : -

DNA sequence :
GTGCCGCGCCTCTTGGAAGGGCGCGCGATGGCTGACGACCAGAACAACGACCTGGGCTCGAAGGAGCAGGAAATCTACGA
CCAGCGGCTGGAGAAGGCCGCCAAGTGGCGGGAGGCGGGCTTCAACCCGTATGGCAACGGCCACCGCCCCCAGCACCTCG
CCGCGGACATCCTCGCGAAACACGCTGATGACACCGCCGAGTCGCTCGAGCAGACGCCCGTCACGTACGACGTCGCCGGT
CGCCTCATCGCGATGCGCTCGTTCGGCAAGGCCGCCTTCATCAAGCTGCGGGATCGCTCCGGAGAGATCCAGGTCCACAT
GAAGAAGGACGCGCTGGCGGAGGCCTACGAGGTCTTCAAGCTGTGCGACCTGGGTGACTTCCTCTCCGCCACGGGCACGC
TGTTCCGCTCGAAGACGGGCGAGCTGACGCTGGCCGCGACGAAGTTCGCGCCGCTCACCAAGTCCCTGCGCCCGCTGCCG
GAGAAGTGGCACGGCCTGACGGACGTGGAGATCCGCTACCGTCAGCGCTACCTGGACCTCGTGTCCAACCCGGACGTGAA
GCAGACGTTCCTCCGGCGCAACAAGCTCATCCGCTTCATCCGCAACTTCCTCGACGCGCGTGACTTCGTCGAAGTGGAGA
CGCCGATGATGCACCCGCTCGTGTCGGGTGCGGCGGCGCGTCCCTTCTCCACGCACCACAACGCGCTCGACATCGACCTG
TACATGCGCATCGCTCCAGAGCTGTACCTGAAGCGACTGGTGGTGGGCGGCCTGGAGCGCGTCTACGAGGTGAACCGGAA
CTTCCGCAACGAGGGCATCAGCACCCGGCACAACCCCGAGTTCACGATGCTCGAGTTCTATCAGGCGTACGCCACGTACG
AAGACCTGATGGACCTGAGCGAGGAGATGATCTCCGAGGCGGCCAAGGCCGTCACCGGCGACACGAAGGTGAAGTACGGC
GAGCACGTGCTCGACTTCGGCAAGGGCTGGAAGCGCATCTCCATGACGGAGGCCATCCGCGAGGGCGTGGGCGGCGCGCT
GTCCGACAAGGACATGTCGGACCCGGACAAGCTCCGGCACGAGCTGCTCAAGACGACGCGCGGCGAGGCCGAGCGTCGGG
CCATCGAGACGATGAACCACGGCGAGCTGGTGGGCGCGCTCTTCGAGGCCCACGTCGAGCACACCCTGATTCATCCCACC
TTCATCACCCATTTCCCCACCGCGGTCTCCCCGCTGGCCCGCAGGAACGACCAGAACCCCGACGTTGCGGACCGCTTCGA
GCTGTACGTGGCGGGTCGCGAAATCGCGAACGCGTTCTCCGAGCTGAACGACCCCCTGGACCAGAAGGGGCGCTTCCAGT
CTCAGCTCGACGCGAAGCAGCGGGGGCAGCAGGAGACGATGGACTACGACGAGGACTACATCCGAGCACTCGAGCACGGC
ATGCCGCCCACGGCCGGCCAGGGAATCGGGATTGATCGGCTCGCGATGTTGTTCACGGATTCTCAGAGCATCCGCGACGT
CATCCTGTTCCCACTCCTCAAGCCACTGGCGAAGTAG

Protein sequence :
MPRLLEGRAMADDQNNDLGSKEQEIYDQRLEKAAKWREAGFNPYGNGHRPQHLAADILAKHADDTAESLEQTPVTYDVAG
RLIAMRSFGKAAFIKLRDRSGEIQVHMKKDALAEAYEVFKLCDLGDFLSATGTLFRSKTGELTLAATKFAPLTKSLRPLP
EKWHGLTDVEIRYRQRYLDLVSNPDVKQTFLRRNKLIRFIRNFLDARDFVEVETPMMHPLVSGAAARPFSTHHNALDIDL
YMRIAPELYLKRLVVGGLERVYEVNRNFRNEGISTRHNPEFTMLEFYQAYATYEDLMDLSEEMISEAAKAVTGDTKVKYG
EHVLDFGKGWKRISMTEAIREGVGGALSDKDMSDPDKLRHELLKTTRGEAERRAIETMNHGELVGALFEAHVEHTLIHPT
FITHFPTAVSPLARRNDQNPDVADRFELYVAGREIANAFSELNDPLDQKGRFQSQLDAKQRGQQETMDYDEDYIRALEHG
MPPTAGQGIGIDRLAMLFTDSQSIRDVILFPLLKPLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 9e-109 47
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 3e-80 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_05188 YP_007362154.1 lysyl-tRNA synthetase VFG1668 Protein 5e-109 47