Gene Information

Name : MYSTI_04765 (MYSTI_04765)
Accession : YP_007361739.1
Strain : Myxococcus stipitatus DSM 14675
Genome accession: NC_020126
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6107913 - 6110534 bp
Length : 2622 bp
Strand : -
Note : -

DNA sequence :
ATGCGCGTTGAACCCAAGACCCTTGTTCGGCGCCTGACGCCCACGGCCACTCGGATGTTGGAGACCGCGGTGTCTCGGGC
GAGCAGCGCTCGGTGCTACGAAATCGTCCCCGAGCACCTGCTGCGGCAGTTGCTGGAGGATGAAGAGGGCGAGGCCTCGC
TGCTCTTGCGGCACTTCCAGGTGGACCGCTCGAAGGTGCTCGCGTCCGTGGAGGACGGGCTCAAGTCGCTGCGCACGGGC
AACTCGGGGCGGCCCGTGTTCTCGGAGAGCCTGTTCCAGTGGTTCGAGGACGCGTGGCTGGTGGCCTCGCTGGAGCACGG
CGTGAGCCGGCTGCGCTCGGGCGTGCTGATGTGGCAGTGGATTGCGCGCTCGGAGCGCTACACCGCCGAGTCGTATTCGG
CGCTGGATGCCATCTCGGTGGAGACGCTCAAGAAGGTCTTCGAGGAGGTGGTGGGCCGCTCGAAGGAAGCCGCCGAGGTG
AGCAGCGCGACGGCGGCGGCGCCCTCCGGCGGTGGAGGCCGAGGCGAGGAGGCGCTGTCGCGGTTCACCACGTCGTTCAC
GGAGAAGGCGCGCACGGGGAAGATCGACCCCATCTTCGGGAGAGATCGGGAGATTCGTCAGGTCATCGATGTGCTGGCGC
GGCGCCGCAAGAACAACCCCATCATCGTGGGCGAGCCGGGCGTGGGGAAGACGGCGCTCGTGGAGGGGTTGGCGCGCGCC
ATCGTCGCAGGGGATGTGCCGGAGTCCATGCGCAACCTGGAGGTGCTGGGGTTGGACCTGGGCGCGCTCCAGGCGGGTGC
GGGCGTCCGCGGCGAGTTCGAGAACCGGCTCAAGGCGGTCATCTCCGAGGTGAAGGGCTCGCCGAAGCCCATCATCCTGT
TCATCGACGAGGCGCACACCATCATCGGCGCGGGAGGCGCGCAGGGGGGCGGTGACGCGGCGAACCTGCTCAAGCCGGAG
CTGGCGCGTGGCGAGCTGCGGACCATCGCCGCCACCACGTGGGCCGAGTACAAGAAGTACTTCGAGAAGGACGCCGCGCT
GGAGCGTCGCTTCCAGCCCATCAAGGTGGACGAGCCTTCCGAAGAGGACGCGGTGCTGATGCTGCGTGGGTTGTGCCCCG
CCTATGCGAAGTCGCACGGCGTCACCATCCGCGACGAGGCGGTGGTCGCCGCGGTGTCGCTGTCACACCGTTACATCTCC
GGGCGGCAGCTTCCGGACAAGGCGGTGGACCTGCTCGACACGGCGGCGGCGCGGGTGAAGATCGAACAGAGCGCGCGTCC
GGACGAGCTGGTGGAGGTGGAGTCTCGTCTGGCGGCGCTGGAGCGGGAGCTGGCGGTGCGTGAGCGGGAGCTCGCCGCGG
GGCACCCGGTTCCGCCGCCGGAGGACGGCCCGACGTTGGAGGAGCGGCTGGCGGCGACGCGGGACTCGGTCGCGACGGTG
CGCGCCCGGTGGGAGCAGGAGCTGGCCGCGGTGGATGTCGTGCGCCGCGCGCGTGCGGAGCTCGACGCCGCGAAGGAGGG
CGACGACACCTCGAAGCTGAAGGCCGACGTCGCCGAGGCGCGCGCCCAGCTGGAGAAGCTCCAGGGCGAGTCTCCGTTGA
TCCACGTGGACGTGGACCCGGACGTGGTGGCGCGAGTGGTCGCGGGCTGGACGGGCGTGCCGGTGGGCAAGCTGCGCAGC
AGCTCCGTGGGCGCGGTGCTCACGCTGGAGCAGACGCTGCGCTCGCGCGTGAAGGGACAGGACGCGGCGCTGCGCGCGGT
GGCGGAGACCATCCGCATGTCGCATGCGGGCATCCGCAATCCATCCACGCCCATTGGCGTGTTGCTCTTCGTGGGCCCCA
GCGGCGTGGGCAAGACGGAGACGGCGCTGGCGCTGGCGGACACGCTCTATGGCGGGGACCGCTTCCTCACGACCATCAAC
ATGTCGGAGTTCCAGGAGAAGCACACCGTGTCGCGCCTCATCGGCTCCCCGCCGGGCTACGTGGGGTACGGAGAGGGCGG
TGTGTTGACGGAGGCCGTGCGCCAGCGGCCGTACTCGGTTGTGCTGCTGGACGAGTGCGAGAAGGCGGACCTGGAGGTGA
TGAACCTCTTCTACCAGGTGTTCGACAAGGGCATGTTGTCCGACGGTGAGGGGCGCCTCATCGACTTCCGCAACACGGTG
GTCATCCTCACGAGCAACCTGGCCACGGATGCGCTGATGCAGCTGTACTCGGGCCCGGAGGCGCCCAAGACGGAGACGGT
GACCGAGACGATTCGCCCCATCCTCAGCCGGCACTTCAAGCCGGCGCTGCTGGCGCGCATGTCGGTGGTGCCGTTCATTC
CAATTGCACGCGATGTGTTGAAGGACATCGCACAGATGAAGCTGGCCGCGCTGGCGGACCGGCTGCACACGTCGCACCGG
GTCAAGACGGAGTTCGCTCCGGAGGTCACCGAGGAGTTCGCGCGGCGGTGCCTGGACAACGACTCGGGGGCTCGCAACGT
GGACCACCTGCTGCGCTCCTCGCTGATGCCGCGTCTGTCCATGGAGCTGCTGGAGCGCCTGGCGGCGGGAGGGGTGCCCG
GGCGCCTGCGCGTGGGTCTGGGTGCGAGCGGGGACTGGGACCTGTCATTCTCGGACGCCTAG

Protein sequence :
MRVEPKTLVRRLTPTATRMLETAVSRASSARCYEIVPEHLLRQLLEDEEGEASLLLRHFQVDRSKVLASVEDGLKSLRTG
NSGRPVFSESLFQWFEDAWLVASLEHGVSRLRSGVLMWQWIARSERYTAESYSALDAISVETLKKVFEEVVGRSKEAAEV
SSATAAAPSGGGGRGEEALSRFTTSFTEKARTGKIDPIFGRDREIRQVIDVLARRRKNNPIIVGEPGVGKTALVEGLARA
IVAGDVPESMRNLEVLGLDLGALQAGAGVRGEFENRLKAVISEVKGSPKPIILFIDEAHTIIGAGGAQGGGDAANLLKPE
LARGELRTIAATTWAEYKKYFEKDAALERRFQPIKVDEPSEEDAVLMLRGLCPAYAKSHGVTIRDEAVVAAVSLSHRYIS
GRQLPDKAVDLLDTAAARVKIEQSARPDELVEVESRLAALERELAVRERELAAGHPVPPPEDGPTLEERLAATRDSVATV
RARWEQELAAVDVVRRARAELDAAKEGDDTSKLKADVAEARAQLEKLQGESPLIHVDVDPDVVARVVAGWTGVPVGKLRS
SSVGAVLTLEQTLRSRVKGQDAALRAVAETIRMSHAGIRNPSTPIGVLLFVGPSGVGKTETALALADTLYGGDRFLTTIN
MSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDECEKADLEVMNLFYQVFDKGMLSDGEGRLIDFRNTV
VILTSNLATDALMQLYSGPEAPKTETVTETIRPILSRHFKPALLARMSVVPFIPIARDVLKDIAQMKLAALADRLHTSHR
VKTEFAPEVTEEFARRCLDNDSGARNVDHLLRSSLMPRLSMELLERLAAGGVPGRLRVGLGASGDWDLSFSDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-118 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_04765 YP_007361739.1 ATP-dependent chaperone protein ClpB VFG2076 Protein 5e-133 48
MYSTI_04765 YP_007361739.1 ATP-dependent chaperone protein ClpB VFG2084 Protein 5e-128 45