Gene Information

Name : MYSTI_02839 (MYSTI_02839)
Accession : YP_007359839.1
Strain : Myxococcus stipitatus DSM 14675
Genome accession: NC_020126
Putative virulence/resistance : Virulence
Product : FliQ/MopD/SpaQ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3607032 - 3607295 bp
Length : 264 bp
Strand : +
Note : -

DNA sequence :
ATGAACCAGCTCACGTTCATCACGCAGGAGGCGCTGTTCCTGGTGCTCGTGGTGTCGGCCCCGCCGGTGCTGATGAGCCT
CCTGGTGGGCTTCATCATCTCGCTGTTCCAGGCCACCACGCAGATTCAGGAGCAGACGCTCACCTTCGCGCCCAAGGTCA
TCATCGTCTTCGGCGTGCTGGCCATGACGGGGCCGTGGATTGGAAGCCAGCTGATGCGCTTCACCTTCCACGTCTTCGAC
CGGTTCCCCGCGCTCATCAAATGA

Protein sequence :
MNQLTFITQEALFLVLVVSAPPVLMSLLVGFIISLFQATTQIQEQTLTFAPKVIIVFGVLAMTGPWIGSQLMRFTFHVFD
RFPALIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 1e-09 50
hrcS AAT96201.1 HrcS Virulence T-PAI Protein 9e-11 49
hrcS AAG33885.1 HrcS Virulence Hrp PAI Protein 7e-11 49
hrcS NP_791221.1 type III secretion protein HrcS Virulence Hrp PAI Protein 9e-11 49
hrcS AAT96147.1 HrcS Virulence T-PAI Protein 9e-11 49
hrcS ABQ88360.1 HrcS Virulence Hrp PAI Protein 7e-08 48
hrpO AAB05076.1 HrpO Virulence Hrp PAI Protein 7e-08 48
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 2e-11 47
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 3e-11 46
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 3e-11 46
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 3e-11 46
ysaS AAS66847.1 YsaS Not tested SSR-1 Protein 5e-12 44
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 3e-11 43
spaQ AAS66866.1 SpaQ Not tested SSR-2 Protein 1e-10 42
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 0.002 42
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 0.002 42
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-09 42
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-09 42
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 3e-09 42
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 3e-09 42
escS AAK26701.1 EscS Virulence LEE Protein 2e-09 42
escS AAL57528.1 EscS Virulence LEE Protein 2e-09 42
escS CAC81848.1 EscS protein Virulence LEE II Protein 2e-09 42
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 0.002 41
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 0.002 41
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 0.002 41
unnamed AAL06355.1 EscS Virulence LEE Protein 1e-09 41
escS CAI43888.1 EscS protein Virulence LEE Protein 4e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_02839 YP_007359839.1 FliQ/MopD/SpaQ family protein VFG0395 Protein 6e-10 53
MYSTI_02839 YP_007359839.1 FliQ/MopD/SpaQ family protein VFG0187 Protein 4e-08 53
MYSTI_02839 YP_007359839.1 FliQ/MopD/SpaQ family protein VFG0043 Protein 1e-11 49
MYSTI_02839 YP_007359839.1 FliQ/MopD/SpaQ family protein VFG2132 Protein 3e-15 48
MYSTI_02839 YP_007359839.1 FliQ/MopD/SpaQ family protein VFG2454 Protein 1e-10 44
MYSTI_02839 YP_007359839.1 FliQ/MopD/SpaQ family protein VFG1260 Protein 9e-11 43
MYSTI_02839 YP_007359839.1 FliQ/MopD/SpaQ family protein VFG0520 Protein 6e-04 41