Gene Information

Name : MYSTI_00232 (MYSTI_00232)
Accession : YP_007357275.1
Strain : Myxococcus stipitatus DSM 14675
Genome accession: NC_020126
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 300565 - 301293 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGGAGCAGCTCAACCGTACCGGCCTGGAGGAAGGCACCATCCAGGTCCTGCTCGTCGAGGACGACGAGCGACTGGCCCG
CCTCACCACTCGATATCTCCATGAGCATGGGCTCGTCGTCACGGTGGCCGCCACGGGCAACGACGCGCTGCTGGAGTCCC
AACGCCACGTCTTCGACATCATCCTCCTGGACCTGATGCTGCCCGGCCGCGACGGGCTGGCCGTCTGCCGCGAGCTGCGC
GGCCGCACCGACGTCCCCATCATCATGGTCACCGCGCGCGCCGAGGAGGGGGACCGCGTGCTCGGCCTGGAGACCGGCGC
GGACGACTACCTGCCGAAGCCCTACTCCTCCCGGGAGCTGCTCGCGCGCATCCGCGCCCAGGTCCGCCGCGCCCGAGGCC
GCACGGGCCCGCCGTCGCAGCCGGTGCAGACGGGGCGCCTGGTGCTGGACCCGCGCAACCTCCGTGTCACGCTGGATGGA
AAGCCCCTGCACCTCACGACGTACGAGTTCAGCCTGCTGCGCGTGCTCGCCGAGCGCGCCGGCCGGGTGCTCAGCCGCGA
GCAGCTCCTGGACCTGGTGAAGGGCAGCTCCGACGAGGTGTTCGACCGCTCCGTCGACGTGCACATCTTCCGGCTCCGTC
AGAAGCTGGAGGTCGACCCGCGCAACCCCCTGCTGCTGAAGACGGTGCGAGGCGCGGGCTACATGCTCGCGTTGGGAGGC
GAGGGGTGA

Protein sequence : 
MEQLNRTGLEEGTIQVLLVEDDERLARLTTRYLHEHGLVVTVAATGNDALLESQRHVFDIILLDLMLPGRDGLAVCRELR
GRTDVPIIMVTARAEEGDRVLGLETGADDYLPKPYSSRELLARIRAQVRRARGRTGPPSQPVQTGRLVLDPRNLRVTLDG
KPLHLTTYEFSLLRVLAERAGRVLSREQLLDLVKGSSDEVFDRSVDVHIFRLRQKLEVDPRNPLLLKTVRGAGYMLALGG
EG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-24 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP000034.1.gene3671. Protein 6e-37 44
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP001918.1.gene5135. Protein 1e-25 44
MYSTI_00232 YP_007357275.1 DNA-binding response regulator BAC0533 Protein 4e-27 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP000647.1.gene4257. Protein 4e-27 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP004022.1.gene1676. Protein 2e-35 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator BAC0596 Protein 5e-34 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP000034.1.gene2186. Protein 2e-34 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP001138.1.gene2239. Protein 5e-34 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_002695.1.916589.p Protein 2e-34 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator BAC0039 Protein 2e-34 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_011595.7057856.p0 Protein 6e-32 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_010410.6002989.p0 Protein 6e-32 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_010400.5986590.p0 Protein 5e-32 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP004022.1.gene3215. Protein 2e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_002695.1.915041.p Protein 2e-27 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP000034.1.gene3834. Protein 2e-27 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 1e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 2e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 1e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 2e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 2e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 2e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 1e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 2e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 2e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 2e-31 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP000647.1.gene2531. Protein 2e-33 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP001918.1.gene3444. Protein 2e-33 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP001138.1.gene4273. Protein 1e-26 41
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_012469.1.7686381. Protein 2e-30 41
MYSTI_00232 YP_007357275.1 DNA-binding response regulator CP000675.2.gene1535. Protein 6e-36 41
MYSTI_00232 YP_007357275.1 DNA-binding response regulator NC_008702.1.4607594. Protein 5e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_00232 YP_007357275.1 DNA-binding response regulator VFG1389 Protein 1e-22 43
MYSTI_00232 YP_007357275.1 DNA-binding response regulator VFG0596 Protein 6e-25 42
MYSTI_00232 YP_007357275.1 DNA-binding response regulator VFG1390 Protein 3e-24 41