Gene Information

Name : MYSTI_02128 (MYSTI_02128)
Accession : YP_007359139.1
Strain : Myxococcus stipitatus DSM 14675
Genome accession: NC_020126
Putative virulence/resistance : Unknown
Product : IS5 family transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2696959 - 2697876 bp
Length : 918 bp
Strand : +
Note : -

DNA sequence :
GTGAGGTTCACGGCCATCCAGGAGGAGAAGGCGAACTACCCGGTGGCGATGCTGTGCCGTGTGCTGGAGGTGTCCCGAGC
GGGCTACTACGCCTGGGAGGGACGTGAAGCGTCGGCACGCCAGAAGGCCAATGCGGCGCTGGTGGAGCGAATCCAGCAGG
TGCATCAGGACAGCCGCCGCACCTATGGCAGCCCACGCGTCCAGGCCGAGCTGAAGGCCCAGGGGCTGCCCGTGGGCCGG
CACCGCGTGGCCCGGCTCATGCGCGAGGCAGGGCTCCGCGCTCGTCGACGCAGACGGTTCGTGCATACCACGGACTCCAA
GCACAGCCTCTCGGTAGCGCCCAACATGCTGGCTCGCGACTTCAATCCACCAAGGCCCGACCGGACGTGGGCGACGGACA
TCACGTACGTGCCCACGCGGGAGGGCTGCCTCTACCTGGCAGTAGTGCTGGACCTCTTCAGTCGGCGCGTCATCGGTTGG
GCCATGGACCGCTGCATCGACCAGCACCTGGTGCTTTCGGCTCTCGACATGGCGCTCAAAGGTCGCTGTCCCCCAGCGGG
ACTGCGGCACCACTCGGATAGGGGCAGCCAATACGCCAGTGAGGACTACCAGCGAGCGCTGGCCGCCCGCGGCATCCGGT
GCAGCATGAGCCGCAAGGCGAACTGCTGGGACAACGCCGTGGTGGAGAGCTTCTTCTCCATGCTGAAGACAGAGCTGGTG
CACGACGCGGACTTCTCGACGCGCGAGGCGGCGAAGGTGGCTTGTTCGAGTTCATCGAGGTGTTCTACAACCGCAAGCGG
CGGCACTCCTCACTTGGCTACGTCAGTTCCGCCGAGTTCGAGAAGGCCGCCTCGCAGGTGCCACTGGCTGCTTAACCCAC
CTGTCCACAGAACCCGGGCAAGCTCAGGGGCCGGCTGA

Protein sequence :
MRFTAIQEEKANYPVAMLCRVLEVSRAGYYAWEGREASARQKANAALVERIQQVHQDSRRTYGSPRVQAELKAQGLPVGR
HRVARLMREAGLRARRRRRFVHTTDSKHSLSVAPNMLARDFNPPRPDRTWATDITYVPTREGCLYLAVVLDLFSRRVIGW
AMDRCIDQHLVLSALDMALKGRCPPAGLRHHSDRGSQYASEDYQRALAARGIRCSMSRKANCWDNAVVESFFSMLKTELV
HDADFSTREAAKVACSSSSRCSTTASGGTPHLATSVPPSSRRPPRRCHWLLNPPVHRTRASSGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-43 47
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-43 47
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-43 47
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-40 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-40 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-40 46
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-40 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-40 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-40 46
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-40 46
unnamed AAF09022.1 unknown Not tested SHI-O Protein 7e-41 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-40 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-37 43
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-38 43
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 5e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYSTI_02128 YP_007359139.1 IS5 family transposase orfB VFG1706 Protein 6e-41 46