Gene Information

Name : G148_0865 (G148_0865)
Accession : YP_007355863.1
Strain : Riemerella anatipestifer RA-CH-2
Genome accession: NC_020125
Putative virulence/resistance : Virulence
Product : Nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 917676 - 918647 bp
Length : 972 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAATAGAAAAATATTAATTACTGGAGGGGCAGGTTTTATTGGCTCGAACCTTACAGAACACTTTTTGAGTAAAAA
TTATCAAGTAAGAGTTTTAGATAACTTTTCCACAGGTCATAAATACAATATAGAACCTTTTTTTAAGAATGAAAAATTTG
AATTAATTGAAGGAGATATTAGGAACTTAGAGATTTGTAATGAGGCATGTGAAGGAGTAGACTATGTCTTACATCAGGCC
GCTTTAGGTTCTGTTCCTCGCTCTATTGAAAATCCAATTACAAGTAATGAAGTTAATGTTTCGGGATTTCTTAATATGTT
GGTAGCAGCTAGAGATGCTAAAGTTAAACGCTTTGTGTATGCAGCAAGTTCTTCTACTTATGGAGATTCCCAATCGTTAC
CAAAAGTAGAAGAGGTTATTGGAAAGCCACTGTCACCTTATGCGATTACTAAATATGTTAATGAACTCTATGCTGATGTG
TTTAGTCGTACTTATGGTATGGAGTGCATAGGCTTGAGATATTTTAATGTTTTTGGTAGAAGACAAGACCCTAAAGGAGC
CTATGCAGCGGTTATTCCAAAATTTGTGATTCAGTTGATGAATTATCAGTCGCCAACTATCAATGGTAATGGTAGTTACT
CAAGAGATTTCACTTATATTGATAATGTGATTCAGATGAATGAGTTAGCAATGTTAACCGATAATCCGGAAGCTGTAAAT
ACCGTTTATAACACGGCGGTAGGAGATAGGACTACTATTAAACAAATGGCAGAATTGCTGAAAGAATACTTGTCGAAATA
CGATGAGAAAATAGGCGAAGTTGAAATTTTGCACGGTCCCAACAGAATAGGAGATATACCTCATTCTTTAGCCTCCATAG
ACAAAGCAAAGGAACATTTAGGATACGCTCCAACATATGTTTTTGAAGAAGGCTTGAAAGAGGCGGTGGATTGGTATTGG
GAGAATTTGTGA

Protein sequence : 
MSNRKILITGGAGFIGSNLTEHFLSKNYQVRVLDNFSTGHKYNIEPFFKNEKFELIEGDIRNLEICNEACEGVDYVLHQA
ALGSVPRSIENPITSNEVNVSGFLNMLVAARDAKVKRFVYAASSSTYGDSQSLPKVEEVIGKPLSPYAITKYVNELYADV
FSRTYGMECIGLRYFNVFGRRQDPKGAYAAVIPKFVIQLMNYQSPTINGNGSYSRDFTYIDNVIQMNELAMLTDNPEAVN
TVYNTAVGDRTTIKQMAELLKEYLSKYDEKIGEVEILHGPNRIGDIPHSLASIDKAKEHLGYAPTYVFEEGLKEAVDWYW
ENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-75 54
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-75 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G148_0865 YP_007355863.1 Nucleoside-diphosphate-sugar epimerase VFG0430 Protein 4e-76 54