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Name : G148_0862 (G148_0862) Accession : YP_007355860.1 Strain : Riemerella anatipestifer RA-CH-2 Genome accession: NC_020125 Putative virulence/resistance : Virulence Product : putative nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 912930 - 914411 bp Length : 1482 bp Strand : + Note : - DNA sequence : GTGAAGGAAATTTTTCAATGGGCAAAAGAATACAGGAGAAGCTACTTAAGAAAAAAAATATTACTATTGGGAATAGGAGA AGAGTCGGTTGCTATTGCAAAAGCGGTGATGGGTAATCCTTTTTTACCATACGAGGTCGTCGGGTTTATTACTGCTCGAA AGGATTCAAGGAAAGCCAAACTCTTGGGGAAGAGAATTTATACCAGAGATTTTTTAGAAAAGACTACCAGAGAATATTTA GGTATAGATGGAGTTTTAATTGGTAGTAATACAGCCTCAATAGAGGAGATTGCAGAATGGGTTAATTTGTTTTTAGAGAA AGATTTAAAGGTATTTAAATCTCCGACCGTTCAAAAGTTGAGAAATGATGGGAGTAATATTAAAAATTTTCAAATAGAAG ATTTACTTAATAGAAAGCCTATCGTTATAGAAAATGAGGAAGTAAAAAAGAGGCATCATCAAAAATCGGTTTTAGTAACA GGAGGAGCAGGTTCTATAGGGAGTGAAATTGTGAGACAAGTTGCTCAATTTGAGCCGTCTTTGATAGTCGTTTTAGACCA AGCAGAAACGCCCTTACACGAGATACAATTAGAAGTAGAAGAAAATTACCCCAATATTAAGTTTGAGTTTATATTGGCTG ATATAACCAATAAAGAACGATTGGAAGCTGTGTTTAAGGAATACAACTTCTCTATGGTATATCACGCTGCTGCCTATAAA CATGTTCCTTTGATAGAAAATAATCCGCATGAAGCAGCTCTAGTTAATATTCAAGGAAGTAAGAACTTGGCATTATTATC CAGTCGTTTTAAAGTTAATAGGTTTGTGATGGTCTCTACGGATAAGGCTGTTAACCCTACCAATGTGATGGGGGCGTCTA AAAGAGCGGCAGAGCTTTTTGTTCAAGCATTACAAAATGAACCAGATAACCAAACTAAATTTATTACGACTAGATTTGGT AATGTGTTGGGGTCTAATGGTTCTGTAATTCCTCATTTTAGAAAACAAATAGAGAAAGGAGGTCCTGTTACTATTACGCA TCCTGAAATTACGAGGTATTTTATGACTATTCCAGAGGCTTGTGAGCTTGTGTTACAAGCAGGGACTATGGGAAAAGGAG GAGAAATATTTGTATTTGATATGGGAGAACCTGTAAAAATACTTAATTTGGCAAGAAGAATGATTAAATTGTCTGGTCTA GAGCCAGATGTAGATATAAAAATTGTTTATACAGGGCTAAGACCAGGGGAAAAACTATATGAAGAACTTTTGAGTGATGA TACAAAAACTCTTCCTACACATCACGAGAAAATCATGATTTCTAAGGACTCAGTTATGTTATATGCGGAAATAGATGAGT TGACATCTAGAATATATGAGAAAGCTAAAGCTAAAGATAAAGTGGAAGTCGTTAAGATTTTAAAAGAAATAGTTAAAGAG TTTAGAAGTAATAATTCTGTGTTTGAGTCTTTAGATAAGTAG Protein sequence : MKEIFQWAKEYRRSYLRKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITARKDSRKAKLLGKRIYTRDFLEKTTREYL GIDGVLIGSNTASIEEIAEWVNLFLEKDLKVFKSPTVQKLRNDGSNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVT GGAGSIGSEIVRQVAQFEPSLIVVLDQAETPLHEIQLEVEENYPNIKFEFILADITNKERLEAVFKEYNFSMVYHAAAYK HVPLIENNPHEAALVNIQGSKNLALLSSRFKVNRFVMVSTDKAVNPTNVMGASKRAAELFVQALQNEPDNQTKFITTRFG NVLGSNGSVIPHFRKQIEKGGPVTITHPEITRYFMTIPEACELVLQAGTMGKGGEIFVFDMGEPVKILNLARRMIKLSGL EPDVDIKIVYTGLRPGEKLYEELLSDDTKTLPTHHEKIMISKDSVMLYAEIDELTSRIYEKAKAKDKVEVVKILKEIVKE FRSNNSVFESLDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-74 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| G148_0862 | YP_007355860.1 | putative nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 5e-67 | 41 |
