Gene Information

Name : G148_0433 (G148_0433)
Accession : YP_007355432.1
Strain : Riemerella anatipestifer RA-CH-2
Genome accession: NC_020125
Putative virulence/resistance : Virulence
Product : ATPases with chaperone activity, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 440217 - 442724 bp
Length : 2508 bp
Strand : -
Note : -

DNA sequence :
ATGATGAGTAATAAATTTTCGGGAGGATTGGATAAAGTCCTCAAAGCGAGTGCTAAAGAAGCAAAAAGATTAGAAAGTGA
ATTTCTTAATACCGAACACCTTCTTTTAGGGATTATTAAAACAGATAATTCTGCGAGGGAAATATTACAGAATTTACAGG
TAGATTTAACCCAAATAAGACGAAAGATAGAAGCTTTAAACTCTTTAAGTTCTAATGTTTTTCCACCGAAAGAAATGGAG
GTAATTCCATTTACTAAAATGGCAGATTATGCACTTAAAAGAGCTGATTTGGAAAGTAAAAGTTACCGTTCAGAACATAT
CAATACGGTTCACTTGCTATTGGGTATTCTTTACAAAATGGAAGACCCTACCACTCAGATTCTAGAAAGTTATGATGTAG
ATTATGAGGCGGTTACTAAAGAGTATCGCACGATGTTAGAGCAGAACGGGATTTCGCCTAAAATGAGTAGTGAGTATGAT
GATAGTAATGAGGAAAGAGAAAGCTTTGGGCAACCTAATAAATCAAGTAGCAGTATCGGAACTGCAAAAAGTAAAACACC
TACCTTGGATAATTTCGGTAGAGATTTAACGGCTTTGGCTAAGGAAGGAAGGTTAGACCCAGTAATTGGTAGGGAAAAAG
AGATAGAACGAGTATCACAAATTCTGTCCAGAAGAAAGAAAAATAATCCACTCCTTATTGGAGAGCCAGGTGTGGGGAAA
TCTGCTATTGCAGAGGGGTTAGCATTAAGGATACATCAGAAAAGAGTTTCTCGTGTATTGTACAACAAGCGTGTAATTAC
TTTAGATTTAGCAAGTTTGGTTGCGGGTACAAAGTACAGAGGTCAGTTTGAGGAAAGAATGAAAGCAATTATGACAGAAC
TAGAAAAAAATAGAGATGTCATTTTGTTCATAGACGAGTTGCATACTATTGTAGGGGCGGGAGGTTCTACGGGAAGTTTA
GATGCGTCTAATATGTTCAAACCTGCTTTGGCAAGGGGAGAAATACAATGCATTGGAGCTACTACTTTAGATGAGTACAG
ACAGCATATAGAGAAAGATGGTGCTTTGGAGAGACGTTTCCAAAAAGTAATGGTAGAGCCGACTTCCATAGAAGAAACCA
TTCAGATTTTGTATCAAATTAAAGATAAGTACGAAGAACATCACAATGTAATTTATACAGATGACGCTATCAAGGCTTGT
GTTAATCTTACCTCTAGATACATCACAGATAGATTTTTACCAGATAAAGCCATAGATGCTATGGACGAAGCGGGTTCTAG
GGTTTACATTAAAAATATGAAAGTCCCTACCGAACTTGTAGATTTTGAAGCCAAAATAGAAGAAGTTAAAGACCTTAAAC
AAAAAGCGGTTAAAGCTCAAGATTACCTAGAAGCGAGAAGGCTTAAAGATGAAGAAGAGCGTTTACAAATAGAACTTAAT
TTGGTTCAGGAAGAATGGGATAGAAATGTAAAAGAGATGAAAGAAACGGTTACGGAGGAGAATGTCGCAGAAGTAGTATC
AATGATGAGTGGTGTTCCTGTAACTAAAGTTGGCAAAAACGAACTTGATAAACTTGCCGAAATGGACAAAAACCTTAATG
GTAAGGTAATTGGTCAAGAAGAAGCCGTTAAAAAAGTAGTGAAATCTATCCAAAGAAATAGAACAGGACTAAAAGACCCT
AACCGTCCTATTGGTACTTTTATTTTCCTAGGAACAACAGGAGTTGGTAAAACAGAGCTAGCTAAAGTGATGGCTAAGGA
ATTATTCAACTCCGAAGATGCACTCATAAGAATAGATATGAGCGAATATATGGAGAAATTTGCGGTGTCTAGACTTGTAG
GGGCGCCTCCAGGATATGTGGGGTATGAAGAAGGCGGACAACTTACAGAAGCCGTTAGAAGAAAGCCTTATTCGGTAGTG
CTTTTAGATGAGATAGAAAAAGCTCACTCTGATGTGTTTAACCTATTGTTGCAGATTTTAGATGAAGGTTTCGTAACCGA
TAGTTTGGGTAGAAAAATAGACTTTAGAAATACGATTGTTATTTTGACCTCTAACATTGGTACACGCCAACTGAAAGACT
TTGGTGATGGCGTAGGTTTTGGAACTTCGGCGAAAAAATCCAGTACTGATGCCTACGCAAGAAGTACGATAGAATCGGCT
CTTAAAAAGGCGTTTGCTCCAGAGTTTTTAAATAGAATAGACGATATTATTATTTTCAACGCTTTAGAGAAAGAAGATAT
TAAGAAAATCATAGATTTAGAGCTTAATAAACTTTACCAGAGATTAAGCAAACTAGGCTATACCGTAAGTCTTACAGAGG
AAGCCAAGGACTTTATTGCTGAGAAAGGTTGGGATAAAGATTTTGGTGCTAGACCACTGAAAAGGGCGGTGCAAAAATAC
ATAGAAGATTTACTAGCCGAGCTTTTGGTAACAAAACAATTAAGCGAGGGCGAAAGTGTAGTCTTAAAACTAAATGAAGC
TAAAGACGCTTTAGAAAAACAAAATTAA

Protein sequence :
MMSNKFSGGLDKVLKASAKEAKRLESEFLNTEHLLLGIIKTDNSAREILQNLQVDLTQIRRKIEALNSLSSNVFPPKEME
VIPFTKMADYALKRADLESKSYRSEHINTVHLLLGILYKMEDPTTQILESYDVDYEAVTKEYRTMLEQNGISPKMSSEYD
DSNEERESFGQPNKSSSSIGTAKSKTPTLDNFGRDLTALAKEGRLDPVIGREKEIERVSQILSRRKKNNPLLIGEPGVGK
SAIAEGLALRIHQKRVSRVLYNKRVITLDLASLVAGTKYRGQFEERMKAIMTELEKNRDVILFIDELHTIVGAGGSTGSL
DASNMFKPALARGEIQCIGATTLDEYRQHIEKDGALERRFQKVMVEPTSIEETIQILYQIKDKYEEHHNVIYTDDAIKAC
VNLTSRYITDRFLPDKAIDAMDEAGSRVYIKNMKVPTELVDFEAKIEEVKDLKQKAVKAQDYLEARRLKDEEERLQIELN
LVQEEWDRNVKEMKETVTEENVAEVVSMMSGVPVTKVGKNELDKLAEMDKNLNGKVIGQEEAVKKVVKSIQRNRTGLKDP
NRPIGTFIFLGTTGVGKTELAKVMAKELFNSEDALIRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVV
LLDEIEKAHSDVFNLLLQILDEGFVTDSLGRKIDFRNTIVILTSNIGTRQLKDFGDGVGFGTSAKKSSTDAYARSTIESA
LKKAFAPEFLNRIDDIIIFNALEKEDIKKIIDLELNKLYQRLSKLGYTVSLTEEAKDFIAEKGWDKDFGARPLKRAVQKY
IEDLLAELLVTKQLSEGESVVLKLNEAKDALEKQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-169 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G148_0433 YP_007355432.1 ATPases with chaperone activity, ATP-binding subunit VFG0080 Protein 4e-150 49
G148_0433 YP_007355432.1 ATPases with chaperone activity, ATP-binding subunit VFG0079 Protein 0.0 48