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Name : G148_1374 (G148_1374) Accession : YP_007356372.1 Strain : Riemerella anatipestifer RA-CH-2 Genome accession: NC_020125 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : - Position : 1453686 - 1455383 bp Length : 1698 bp Strand : + Note : - DNA sequence : ATGCATTTATCAGAACAAGAAATTATCCGTAGAGAAAAGTTAGAAAAACTTTCTCAAATGGGCATAAATGCCTTTCCGGC AGACGAATATGCTATTACACATACCACACAATCTATAAAAGAAAATTTTCAAGAAGGAAGCAAGGTTAAAATCGCTGGTA GGCTAATGTCTAGAAGAATCCAGGGGAAAGCTTCTTTTGCCGAATTACAAGATAGCGAAGGCAGAATACAAGTGTATTTT AATAGAGATGAAATTTGTCCTGAGGAAGACAAAACCCTTTATAACGAAGTTTATAAGCATCTTTTAGACATTGGAGATAT TATAGGCGTAGAGGGAGAATTGTTCAAAACTCAAGTAGGAGAAATGACGGTAATGGTTAAAAATTTCACTCTATTAACCA AAACTCTTCGTCCACTTCCTCAACCAAGAACTGATGAAAATGGTGTGGTACACGATGCTTTTAACGACCCTGAACTTCGT TATAGACAGCGCTACGTGGATCTTACAGTAAACCCACATGTTAAAGAAATTTTTGTAAAAAGAACGAAATTGTTTAACGC AATGCGTGGGTTCTTTAATGACGCTGGATATTTTGAGGTAGAAACGCCTATTTTACAGGCTATTCCAGGTGGAGCTTCAG CAAGACCATTCATTACACATCATAATGCCTTGGATATTCCACTATATATGAGAATTGCTAACGAGCTTTATCTTAAAAGA CTTATCGTAGGCGGGTTTGATGGGGTGTATGAGTTCTCCAAAAACTTCCGTAACGAAGGTATGGACCGAACTCACAACCC TGAGTTTACAGCCATGGAGATTTATGTGGCGTACAAGGATTACAACTGGATGATGGATTTTACCGAAAGACTGTTGGAGC ATTGTGCTACTGCGGTGAATGGGAAACCTGAATCTCAGTTTGGCGAACATACCATCAATTGGAAAGCCCCTTACCCAAGA ATTTCCATGACGGACGCCATTCGGAAATTTACGGGGTTTGATATTACGGGAAAAACCGAAGAGGAACTTAGAACCTTTGC CAAATCCATCGGTATTGAAGTGGATGACACGATGGGGAAAGGCAAGCTCATTGATGAAATTTTCGGAGAGAAGTGCGAAG GTAACTTTATTCAGCCGACCTTCATTACTGACTACCCTATCGAAATGTCGCCGCTTACTAAAAAGCACAGAAGCAAAGAG GGCTTAACCGAAAGATTTGAGTTGATGGTTTGTGGAAAAGAAATTGCGAATGCTTACTCTGAGCTTAACGACCCTATTGA CCAAAGAGAACGTTTTGAAGAGCAACTTAAACTTTCAGAAAAGGGTGATGACGAAGCGATGTTTATCGACCAAGATTTCC TAAGAGCTTTAGAATACGGTATGCCGCCTACGGCTGGTTTGGGTATCGGTATGGACAGGTTGGTGATGTTCTTAACGAAT AATGCTTCTATTCAGGAGGTTTTATTCTTCCCTCAAATGAGACCAGAAAAGGCTCAGCCTAAAGTAGAGATTGGAGAAAA TGAAGAAATTATCCTTGGTATTCTTAATAAAAACAACGGTAAAATGCTGATAGCTGACTTAAAAACTCAATCAGGCTTAA GTGGAAAGAAATGGGATAAGTCTTCTAAACTATTAGTTTCTAATAATTTAATTTCTCTAGTAACTGAAGGTGAGGATAAA TATTTCCAAATAGTTTAA Protein sequence : MHLSEQEIIRREKLEKLSQMGINAFPADEYAITHTTQSIKENFQEGSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVYF NRDEICPEEDKTLYNEVYKHLLDIGDIIGVEGELFKTQVGEMTVMVKNFTLLTKTLRPLPQPRTDENGVVHDAFNDPELR YRQRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDAGYFEVETPILQAIPGGASARPFITHHNALDIPLYMRIANELYLKR LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGKPESQFGEHTINWKAPYPR ISMTDAIRKFTGFDITGKTEEELRTFAKSIGIEVDDTMGKGKLIDEIFGEKCEGNFIQPTFITDYPIEMSPLTKKHRSKE GLTERFELMVCGKEIANAYSELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMFLTN NASIQEVLFFPQMRPEKAQPKVEIGENEEIILGILNKNNGKMLIADLKTQSGLSGKKWDKSSKLLVSNNLISLVTEGEDK YFQIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-102 | 44 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| G148_1374 | YP_007356372.1 | Lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 5e-102 | 44 |
