|
Name : D781_0888 (D781_0888) Accession : YP_007343406.1 Strain : Serratia marcescens FGI94 Genome accession: NC_020064 Putative virulence/resistance : Virulence Product : arabinose efflux permease family protein Function : - COG functional category : - COG ID : - EC number : - Position : 947415 - 948617 bp Length : 1203 bp Strand : + Note : PFAM: Major Facilitator Superfamily DNA sequence : ATGAGCCTATCCCCACAACCCGATCTCCTTGCCGGCGCCAAAAGCGCGCCCGCCAACTGGCCCCTGGCGTTCTGCGCCGG TTTATTGGGCATCGGGCAAAATGGTTTATTGGTCGCGCTGCCGGTGCTGGTCAGCATGACCCATCTGTCACTGTCGGTCT GGGCGGGGTTACTGACGCTCGGTTCGATGCTGTTTTTAGTCGGCTCTCCCTACTGGGGACGGCAGTGCGAAGTGCGCGGC TGCAAGTATGTGGTGCTGATGGCGCTGGGCGGCTATCTGTTCAGCTTTGCGCTGCTGGCGCTGGCGGTATGGGGGCTGGC GGCAGGCTGGCTGCCCTCGCTGGCGGGGCTGGGCGCGCTGGTGGCGGCGCGCGTCATTTACGGCCTGACGGTATCCGGCA TGGTGCCCGCTAGCCAGACCTGGGCGCTGCAGCGCGCCGGTCACGAGCGACGCATGGCGGCGCTGGCCACCATCAGCTCG GGGCTGAGCTGCGGCCGCCTATTGGGGCCGCTGTGCGCGGCGCTGGCGCTCTCGTTGCATCCGATGGCGCCGCTGTGGCT GATGGCGCTGGCGCCGTTGCTGGCCCTGCTGGTGGTGTGCCGGCAGCAGAACGATCCGCCGCTGCCGCCGGTGGCGCAGC AGCAAAACCGTTTACAGTGGCATATGCTGCCGTATCTGCTGTGCGCTCTGCTGCTGGCGGCGGCGGTCAGCCTGATGCAA CTGGGGCTGGCGCCGCATCTGACCCGGCTGTTCCAGCACTCTGCAACGGTGGTCAGCCACCACGTCGCGATCCTGCTGAG CGTGGCGGCGGGCTGCACGCTGCTGGCGCAGTTTCTGGTGGTGCGGCCCCAGCGTTTTCCGCCGGCGCAACTGCTGCTAA TTGCCGCGTCGCTGATGGTGGTAGGGTTGGCGCTGATGTGCGCGCAGCCGCTGGCGCTGTTTTACCTGGGCTGTGCGCTG ACGTCATTCGGCGCGGCGATGGCCACGCCGGGCTACCAGCTGCTGCTGAATGACAAACTCTCTACCGGCAAAGGTTCCGG CGTGATTGCCACCAGCCACACGCTGGGCTACGGGCTGAGCGCACTGATGGTGCCGGCGGTGGCGAAATTTTACGGCGAGT CGCAGCTGATTGCGGCGGCGCTGGCGATGGCCGTCCTGCTGGGCGGCGTAAGCGGCTGGCTATGGCGCCGGCGAGAAAAA TAA Protein sequence : MSLSPQPDLLAGAKSAPANWPLAFCAGLLGIGQNGLLVALPVLVSMTHLSLSVWAGLLTLGSMLFLVGSPYWGRQCEVRG CKYVVLMALGGYLFSFALLALAVWGLAAGWLPSLAGLGALVAARVIYGLTVSGMVPASQTWALQRAGHERRMAALATISS GLSCGRLLGPLCAALALSLHPMAPLWLMALAPLLALLVVCRQQNDPPLPPVAQQQNRLQWHMLPYLLCALLLAAAVSLMQ LGLAPHLTRLFQHSATVVSHHVAILLSVAAGCTLLAQFLVVRPQRFPPAQLLLIAASLMVVGLALMCAQPLALFYLGCAL TSFGAAMATPGYQLLLNDKLSTGKGSGVIATSHTLGYGLSALMVPAVAKFYGESQLIAAALAMAVLLGGVSGWLWRRREK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAD54670.1 | unknown | Not tested | SHI-2 | Protein | 4e-60 | 61 |
| shiF | AAD44744.1 | ShiF | Virulence | SHI-2 | Protein | 1e-60 | 61 |
| shiF | YP_002414047.1 | putative membrane transport protein, major facilitator superfamily | Not tested | Not named | Protein | 5e-60 | 61 |
| imm | NP_839224.1 | membrane transport protein | Not tested | SHI-2 | Protein | 2e-60 | 61 |
| imm | NP_709453.1 | membrane transport protein | Not tested | SHI-2 | Protein | 2e-60 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D781_0888 | YP_007343406.1 | arabinose efflux permease family protein | VFG0614 | Protein | 6e-61 | 61 |
