Gene Information

Name : D781_0887 (D781_0887)
Accession : YP_007343405.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : siderophore synthetase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 945531 - 947276 bp
Length : 1746 bp
Strand : -
Note : PFAM: Ferric iron reductase FhuF-like transporter; IucA / IucC family

DNA sequence :
ATGACTATTCAGTTTGCAACCGCAAAGACCGATGTGGCTGCGCAGTGTTTTCTCAACGCATTAATGCGCGAAACCCGGGA
TTGGCAAGTTATTCCGGCTACCGACCACCAGCAACATCCTCAGTTACATATTCCTCTTAATCAGCATCAGGCGATCCGCA
TTAATCTGCGCTACACCTCACCGACGCAGCACCACCACTACCTGTTCCCGGCCACGCTGCATCAGTCAGATGACGGCCAG
GCCACGACGCTCAGCGTTGAGCAACTGGTGGATCTGCTGTTGGCCAAGCCTGCGGTAAAAGGCGAACTGAACGACCAGAC
CGTGGCGCAGTTCCGCCAGCGCGTACTGGAGAGCCACGACAATACGCAGCAGGCGATCGCCGTACGCCTCGACTGGCCGA
CGCTGCGCGACCGGCAGCTGAACTTCGCCGAGGCGGAACAGGGACTGCTGGTCGGCCATGCGTTTCACCCGGCGCCGAAA
TCCCACGAACCGTTTAACCCGCAGCAGGCGCGGCGCTATCTGCCGGACTTCGGCGCGCGCTTCCCGCTGCGCTGGTTTGC
CGCCGATAAGCGCGTGGTGTGCGGCGACAGCCTGACGCTGACGCTGCAGCAGCGCCTGCAGCGCTTTGCTGCCGAAAGCG
CGCCGCAACTGCTGGCGCACTTTACCGACGACGTCTGGCTGCTGCCGATGCACCCGTGGCAGGCCGACCATCTGCTGGCC
CAGTCGTGGTGCCGTGAGCTGGTTGAGCAAGGACTGCTGCGCGATCTGGGCGAGGCCGGCGCACGCTGGCTGCCGACCAG
CTCCTCCCGCTCGCTGTACTGCGAAACCAACCGCGACATGATCAAATTCTCCCTCAGCGTGCGCCTGACCAACTCGGTGC
GCACGCTGTCGGTCAAAGAAGTCAAACGCGGTATGCGGCTGGCGCGGCTGGCGCACACCGATCGCTGGCAAACGCTGCAG
GCGCGTTACCCCACCATGCGCGTGATGCAGGAGGACGGCTGGGCCGGCCTGCGCGCCGCAGACGGCCAGATTCAGGAAGA
AAGCCTGATGGCGCTGCGGGTCAACCTGCTGTTCGATCGCCCGGATACGCAAACCAACGTGCTGGTGACGCTGACCCAGG
CCGCGCCGGACGGCGGCGATAGCCTGCTGGCGGCGGCGGTGCGCCGCCTGGCCGCCCGTCTTGATCTGCCGCTGGCGCAG
ACCGCCCGCTGCTGGCTGGACGCCTACTGCCGACACGTACTGCTGCCGCTGTTCAGCGCCGAGGCGGACTACGGCCTGGT
GCTGCTGGCGCACCAGCAAAATATTCTGGTGGAAATGCAGCAGGATCTGCCGGTCGGCATGCTGTACCGCGACTGCCAGG
GCAGCGGCTTTACCTCCGACGCCACGCCGTGGCTCGATCAGATCGGCGAAGCCGAGGCGGAAAACCGCTTCAGCGAACAG
CAACTGCTGCGTTACTTCCCTTATTACCTGCTGGTGAACTCTACGCTGGCGGTCACCGCCGCGATGGCCGCGGCCGGTTT
TGACAGCGAACAACAGCTGATGGCGCAGGTGCGCGACGCGCTGGCCGGCCTGCGCGCCACGGCGCGCAACACCCGCTGCC
TGGACTACGTGCTGGACAGCAGCCACTGGAACTGCAAAGGCAACTTCTTCTGCTATCTGCACGATCACAACGAAAACACC
ATCGTCGATCCCGCGGTGATCTATTTCGACTTCACCAACCCGCTGCGCGCGCAGGAGGATAAATAA

Protein sequence :
MTIQFATAKTDVAAQCFLNALMRETRDWQVIPATDHQQHPQLHIPLNQHQAIRINLRYTSPTQHHHYLFPATLHQSDDGQ
ATTLSVEQLVDLLLAKPAVKGELNDQTVAQFRQRVLESHDNTQQAIAVRLDWPTLRDRQLNFAEAEQGLLVGHAFHPAPK
SHEPFNPQQARRYLPDFGARFPLRWFAADKRVVCGDSLTLTLQQRLQRFAAESAPQLLAHFTDDVWLLPMHPWQADHLLA
QSWCRELVEQGLLRDLGEAGARWLPTSSSRSLYCETNRDMIKFSLSVRLTNSVRTLSVKEVKRGMRLARLAHTDRWQTLQ
ARYPTMRVMQEDGWAGLRAADGQIQEESLMALRVNLLFDRPDTQTNVLVTLTQAAPDGGDSLLAAAVRRLAARLDLPLAQ
TARCWLDAYCRHVLLPLFSAEADYGLVLLAHQQNILVEMQQDLPVGMLYRDCQGSGFTSDATPWLDQIGEAEAENRFSEQ
QLLRYFPYYLLVNSTLAVTAAMAAAGFDSEQQLMAQVRDALAGLRATARNTRCLDYVLDSSHWNCKGNFFCYLHDHNENT
IVDPAVIYFDFTNPLRAQEDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucA NP_839223.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-167 64
iucA NP_709454.2 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-167 64
iucA AAD44746.1 IucA Virulence SHI-2 Protein 5e-167 64
iucA YP_002414046.1 aerobactin siderophore biosynthesis protein Virulence Not named Protein 3e-167 64
iucA AAK71631.1 IucA Virulence SHI-3 Protein 7e-147 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_0887 YP_007343405.1 siderophore synthetase component VFG0615 Protein 3e-167 64
D781_0887 YP_007343405.1 siderophore synthetase component VFG0940 Protein 1e-167 64
D781_0887 YP_007343405.1 siderophore synthetase component VFG1081 Protein 4e-147 60