Gene Information

Name : D781_0884 (D781_0884)
Accession : YP_007343402.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : lysine/ornithine N-monooxygenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 941511 - 942839 bp
Length : 1329 bp
Strand : -
Note : PFAM: L-lysine 6-monooxygenase (NADPH-requiring)

DNA sequence :
ATGAATCAGCCCCTCGATTTCATCGGCATCGGTATCGGTCCGTTCAACCTCAGCATTGCCGCGCTGGGCAGCGAAGTCGC
CGGTTTCAACAGCCTGTTTCTTGAGCGCAAGCCGCATTTTTCCTGGCATCCGGGCATGATGGTGCCGGACTGCCATATGC
AAACCAGCTTTCTCAAGGATCTGGTCAGCGCGGTGTCGCCGACCAATCCGTACAGTTTTCTCAACTACCTGGTGAAGCGC
AAAAAGTTTTACCGCTTCCTGACCACCGAGCAGCGCACCGTATCGCGCGAAGAGTTTGCCGACTACCTCGACTGGGCGGC
CAACGGGCTCGAGTCGCTGGCGTTCAGCCAGGAGATTGAACAGGTGGCCTTCAACGATCAGCAGCGGCTGTTTGAGGTCA
CCACCCAGCGCGGTATGTTCCAGGCGCGCCACGTGTGCCTCGGCATCGGTAAAAAACCGCTGCTGCCGGCCTGCGTCAGC
GAGCAGAACGATCGCTGCTTCCACGCCAGCGAAATGGCGCTGCGCAACCCGGATCTGGCCGGCAAACGCGTCACCGTGGT
CGGCGGCGGCCAGAGCGGCGCCGATCTGTTCCTGAATATTTTCCGCGCTGAATGGGGGCAGCCGGTGCAGCTCAACTGGG
TGTCGCGCCGCAATAACTACAACGCGCTGGACGAAGCGGCGTTCGCCAACGAGTACTTTACGCCGGAGTATGTGGAGAGC
TTCTACACCCTGAACGACAGCGCCAAACAGCGCATGCTGACGGAGCAGAAGATGACCTCGGACGGCATCACCACGGAATC
TCTGCTGGCGATTTACCGCGCCATGTATCACCGCTTTGAAGTGCTGCGCGAAACGCCCTGGGCGCGCCTGCTGCCGAGCC
GTTCGCTGGCGGCGATGCAGCCGCAGGGCAACGGCTACCAGCTGGTGACCCACCACCATCTCGATCAGGGCAAAGAGACC
TTTGACAGCGACGTGGTGATTTTCGCCACCGGCTATCAGCCGGAGCGCCCGGCGTTTCTGGCGCCGCTGGCCGGGCGGCT
GCAGCTGACCGAGGATGACAACTATCGCGTGGCGCCGGACTTTACCCTGGCGTGGGACGGCCCGGCGGAAAACTGTCTGT
TTGCCGTCAATGCCGGCATGCACAGCCACGGCATCGCCGAACCGCAGCTGAGCCTGATGGCCTGGCGCGCGGCGCGCATC
CTCAACCGGGCGCTGGGCCGGGAAGCGTTTGATTTAACGGCAACCCCGTCGCTGATCCAGTGGCGCAGCCAGCAAGTCGG
AGAAACCTCACGAAATAGTCAATCTATGCTGAATTATTCCGAATTTTAG

Protein sequence :
MNQPLDFIGIGIGPFNLSIAALGSEVAGFNSLFLERKPHFSWHPGMMVPDCHMQTSFLKDLVSAVSPTNPYSFLNYLVKR
KKFYRFLTTEQRTVSREEFADYLDWAANGLESLAFSQEIEQVAFNDQQRLFEVTTQRGMFQARHVCLGIGKKPLLPACVS
EQNDRCFHASEMALRNPDLAGKRVTVVGGGQSGADLFLNIFRAEWGQPVQLNWVSRRNNYNALDEAAFANEYFTPEYVES
FYTLNDSAKQRMLTEQKMTSDGITTESLLAIYRAMYHRFEVLRETPWARLLPSRSLAAMQPQGNGYQLVTHHHLDQGKET
FDSDVVIFATGYQPERPAFLAPLAGRLQLTEDDNYRVAPDFTLAWDGPAENCLFAVNAGMHSHGIAEPQLSLMAWRAARI
LNRALGREAFDLTATPSLIQWRSQQVGETSRNSQSMLNYSEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 5e-145 61
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 5e-145 61
iucD AAK71634.1 IucD Virulence SHI-3 Protein 1e-144 61
iucD AAD44749.1 IucD Virulence SHI-2 Protein 4e-145 61
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 4e-145 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_0884 YP_007343402.1 lysine/ornithine N-monooxygenase VFG1084 Protein 6e-145 61
D781_0884 YP_007343402.1 lysine/ornithine N-monooxygenase VFG0618 Protein 2e-145 61
D781_0884 YP_007343402.1 lysine/ornithine N-monooxygenase VFG0937 Protein 2e-145 61