Gene Information

Name : D781_0883 (D781_0883)
Accession : YP_007343401.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 939215 - 941413 bp
Length : 2199 bp
Strand : -
Note : PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor

DNA sequence :
ATGAAACGCAAGCACCTCTGGATACTGAATCCCTGCCTGCTGGCCATGCTGGCGCCGGCCGCCTGGGCAGACGATCAAAA
AAATGAAGACCAGTTGGTGGTTTCCGCCAACCGTATGCACCGCAGCGCGGCGGAAATGGCGCAGACGACCTGGGTGATTG
AAAGCCAGGAAATTGAACAGCAGGTGCAGGGCGGCAAAGAGATTAAAGAGATCCTCGCCCAGCTGATCCCGGGGATGGAC
GTCAGCAGCCAGGGGCGCACCAACTACGGCATGAACATGCGCGGCCGTTCGATGTTGGTGATGATCGACGGCGTGCGCCA
GAACTCCTCGCGCACCGACAGCCGCCAGCTCGACTCGATCGACCCGTTCAACATCGACCATATTGAAGTTATTTCCGGCG
CCACCTCGCTGTTCGGCGGCGGCAGCACCGGCGGCCTGGTGAATATCGTCACCAAAAAAGGCCAGCAGGAAAAACAGGTG
GAGCTGCAAATCGGCGGCAAAACCGGCTTCGGCGGCCATAACGACCATGATGAGAACGTGGCGGCGGCGGTCAGCGGCGG
CAACGAGCACGCCTCCGGGCGCCTGTCGGTCTCCTACCAGCGCTACGGCGGCTGGTACGACGGCAAGGGCAAAGAGGTAT
TGATCGACAATACCCAGACCGGCCTGCAATATTCCGACCGCATCGACGTGATGGGCACCGGCACCCTGAATATTGATGAC
CACCAGCAGCTGCAGCTGACCACCCAATATTACAAAAGCCAATCTGACGGCGACCACGGCCTGTACCTGGGCGAGAATTT
CTCGGCGGTCACCGGCAACGGCCAGGCCTCCAACAGCGGCAACCTGAATTCCGACCGTATCCCCGGCACCGAACGCCATC
TGATCAACCTGCAGTACTCCAACACCGACTTCTGGGGCCAGGATCTGGTGGCGCAGGTCTATTACCGCGATGAATCGCTA
ACCTTCTACCCGTTCCCGACCCTGAGCAAACAGGGCGACGTCACCAGCATCGGCGCATCGCAGCAGAAAACCGATTTCTA
CGGCGGCAAGCTGACGCTGAACAGCAAGCCGGTCGACGGCCTGACGCTGACCTACGGCGTCGACGCCGAGCATGAAAGCT
TCAACGCCAACCAGCAGTTCTTCGATCTGGACAAGGCGAAGCAGTCCGGCGGCATGGATCTGCAAAACAGTTACAACGTC
GGCCGCTACCCCGGCTACACCACCACCAACCTGGCGCCGTTCCTGCAGGCCAGCTATGACATTAACCCGATCTTCACCCT
GAGCGGCGGCGTACGCTATCAGTACACTGAAAACAAGGTGGATGACTTTATCGGCTACGCGCAGCAGCAGGGCATCGCCA
ACGGCCTGGCCAACTCCGCCGACGCCGTGCCGGGCGGTAAAACCAGCTACAATAATGCGCTGTTCAACGCCGGTCTGTTG
GCGCACCTGACCGAGCGTCAGCAGGTGTGGTTCAACTTCTCGCAGGGCTTTGAGATCCCGGATATCGCCAAATACTACGG
CTCCGGCAACTATGATCTGGTCAACGGCCACTATCAGCTGAAAAACAGCGTCAACGTCAATGACTCCAAGCTCGACGGCA
TCAAGGTCAACGCTTACGAACTGGGCTGGCGCTACACCGGCGACAATCTGCGCACCCAGGTAGCGGCTTATTACTCGCTG
TCTGACAAGACCATTTCGATCAATAAGACCGATATGACCATCAACCTCGACGACGACAAGCGCCGGATTTACGGTGTGGA
AGGGGCGGTGGACTACTTCTTCGACGACAGCGAATGGAGCGCCGGCGCAACCTTCAACCTGATCAAGTCGCAGACCAAGG
TTGACGGCAAGTGGGAGAAACTGACCGTCGACAGCGCCAGCCCGTCGAAAGCCACCGCTTACGTCGCCTGGGCGCCGGGC
GACTGGAACCTACGCGTGCAGTCGCAGCAAACCTTTGACGTTTCCGACGCCGACGGTAAAAAAATCGACGGCTATAACAC
CGTCGATTTCCTGGGCAGCTACCAGCTGCCGGTGGGGAAAGTCAGCTTCAGCGTCGAGAACCTGCTGGACAAAGACTACA
CCACCACCTGGGGCCAGCGGGCACCGTATCTGTACAGCCCGACCTACGGCGCGCCTGAGCTGTATAGCTATAAAGGCCGC
GGCCGCACCTTTGGTCTGAACTATTCGGTACTGTTCTGA

Protein sequence :
MKRKHLWILNPCLLAMLAPAAWADDQKNEDQLVVSANRMHRSAAEMAQTTWVIESQEIEQQVQGGKEIKEILAQLIPGMD
VSSQGRTNYGMNMRGRSMLVMIDGVRQNSSRTDSRQLDSIDPFNIDHIEVISGATSLFGGGSTGGLVNIVTKKGQQEKQV
ELQIGGKTGFGGHNDHDENVAAAVSGGNEHASGRLSVSYQRYGGWYDGKGKEVLIDNTQTGLQYSDRIDVMGTGTLNIDD
HQQLQLTTQYYKSQSDGDHGLYLGENFSAVTGNGQASNSGNLNSDRIPGTERHLINLQYSNTDFWGQDLVAQVYYRDESL
TFYPFPTLSKQGDVTSIGASQQKTDFYGGKLTLNSKPVDGLTLTYGVDAEHESFNANQQFFDLDKAKQSGGMDLQNSYNV
GRYPGYTTTNLAPFLQASYDINPIFTLSGGVRYQYTENKVDDFIGYAQQQGIANGLANSADAVPGGKTSYNNALFNAGLL
AHLTERQQVWFNFSQGFEIPDIAKYYGSGNYDLVNGHYQLKNSVNVNDSKLDGIKVNAYELGWRYTGDNLRTQVAAYYSL
SDKTISINKTDMTINLDDDKRRIYGVEGAVDYFFDDSEWSAGATFNLIKSQTKVDGKWEKLTVDSASPSKATAYVAWAPG
DWNLRVQSQQTFDVSDADGKKIDGYNTVDFLGSYQLPVGKVSFSVENLLDKDYTTTWGQRAPYLYSPTYGAPELYSYKGR
GRTFGLNYSVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 66
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 66
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D781_0883 YP_007343401.1 TonB-dependent siderophore receptor VFG0619 Protein 0.0 66
D781_0883 YP_007343401.1 TonB-dependent siderophore receptor VFG1085 Protein 0.0 66
D781_0883 YP_007343401.1 TonB-dependent siderophore receptor VFG0936 Protein 0.0 66