Gene Information

Name : join (D781_0088)
Accession : YP_007342669.1
Strain : Serratia marcescens FGI94
Genome accession: NC_020064
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 95813 - 96924 bp
Length : 1112 bp
Strand : +
Note : PFAM: HTH-like domain; Integrase core domain; Transposase; manually curated

DNA sequence :
ATGCGTAAAGCCCGTTTTACTGAGCATCAGATCATCGCTGTGATTAAGTCGGTTGAAGCCGGACGAACTGTTAAGGATGT
CTGCCGCGAGGTCGGTATCTCTGAAGCGACCTACTACAATTGGAAATCTAAATACGGTGGTATGGAAGCCTCTGATATTA
AAAAGATAAAGGATCTTGAAGACGAAAACAGGCGTCTCAAGCAAATGTTTGCTGACATCAGCCTTGAGAACCGGGCATTG
AAAGACGTTATCGAAAAAAAGCTTTGAAACCAGCCTTTAAGCGTGAGCTGGTCACTCATCTGATAACGGCGTTCGGACTC
AGTATCCGTCAGGCCTGTCGGAGCCTGAACCTGAGCAGAACGGTTTATCATTATCGTCCGAATACTACGCGTGACGAACC
TGTTATTTCCGCATTGCAGGCTGCCGCTGAACGGTATCCACGATATGGTTTTCCAAAATTGTTTCAGGTGCTGCGGAGGC
AAGGATACCCGTGGAATCATAAAAGGATCCACCGTATTTACTGTCTGCTGAAGCTAAATTTTCGTCGCAAAGGCAAGCAG
CGTCTACCGGTACGTAATCCATCGCCGCTTGCTACGCCTGAAGCGTTAAACCAGAGCTGGTCTGTTGACTTCATGCATGA
TGCCCTGATTTGCGGTCGTCGTTTTCGTACGTTCAACGTCGTTGATGACTTTAATCGCGAGGCGTTGTCGATCGAAATAG
ACCTTAATTTACCAGCTCAACGAGTGGTTCGTGTCCTCGACAGGATCGCAGCAAACCGGGGATATCCCGTAATGCTTCGC
ATGGATAATGGTCCGGAATTCATCTCGCTGGCACTGGCTGAATGGGCAGAGAAACACACGGTAAAACTGGAATTTATCCA
ACCGGGTAAACCGACGCAGAACGCATTCATTGAACGCTTTAACCGGACATATCGCACAGAAATACTCGATTTTTATCTGT
TTAGAACACTGAATGAAGTGCGTGAAATCACGGAGCGATGGTTGTCAGAATATAACTGTGAACGCCCGCATGAATCACTG
AACAACCTGACGCCGGAGGAATACCGCCAACAGTGTTACTTGGCCGGGATCTCAAAAAGTGTGTGGAACTAA

Protein sequence :
MRKARFTEHQIIAVIKSVEAGRTVKDVCREVGISEATYYNWKSKYGGMEASDIKKIKDLEDENRRLKQMFADISLENRAL
KDVIEKKALKPAFKRELVTHLITAFGLSIRQACRSLNLSRTVYHYRPNTTRDEPVISALQAAAERYPRYGFPKLFQVLRR
QGYPWNHKRIHRIYCLLKLNFRRKGKQRLPVRNPSPLATPEALNQSWSVDFMHDALICGRRFRTFNVVDDFNREALSIEI
DLNLPAQRVVRVLDRIAANRGYPVMLRMDNGPEFISLALAEWAEKHTVKLEFIQPGKPTQNAFIERFNRTYRTEILDFYL
FRTLNEVREITERWLSEYNCERPHESLNNLTPEEYRQQCYLAGISKSVWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 1e-112 84